RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 CELF2O95319 508 aaKnown RBP6.04□□□□□ -1.44
SCAF11-214ENST00000550893 ASMTLO95671 621 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 ASLP04424 464 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 SDSP20132 328 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 SDHAP31040 664 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 IGHMBP2P38935 993 aaKnown RBP6.04□□□□□ -1.44
SCAF11-214ENST00000550893 ADCY8P40145 1251 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 ECE1P42892 770 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 FKBP1AP62942 108 aaKnown RBP6.04□□□□□ -1.44
SCAF11-214ENST00000550893 ZNF460Q14592 562 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 ICAM4Q14773 271 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 CATSPEREQ5SY80 951 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 SLFN13Q68D06 897 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 CXXC5Q7LFL8 322 aaKnown RBP6.04□□□□□ -1.44
SCAF11-214ENST00000550893 GGNQ86UU5 652 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 CIR1Q86X95 450 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-214ENST00000550893 RASAL3Q86YV0 1011 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 HIPK4Q8NE63 616 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 CHST13Q8NET6 341 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 ARHGAP45Q92619 1136 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 CAPNS2Q96L46 248 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 BOCQ9BWV1 1114 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 BAZ2AQ9UIF9 1905 aaKnown RBP6.03□□□□□ -1.44
SCAF11-214ENST00000550893 B4E1Z4 1266 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 GOLGA6L22H0YM25 854 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 EYA2O00167 538 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 OPA1O60313 960 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 KRT37O76014 449 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 PDE8BO95263 885 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 ETV4P43268 484 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 RRADP55042 308 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 CD83Q01151 205 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 UBE4AQ14139 1066 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 C20orf194Q5TEA3 1177 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 KANK2Q63ZY3 851 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 ATF7IPQ6VMQ6 1270 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 LDHAL6AQ6ZMR3 332 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 KRT26Q7Z3Y9 468 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 PRMT6Q96LA8 375 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-214ENST00000550893 RNPC3Q96LT9 517 aaKnown RBP6.03□□□□□ -1.44
SCAF11-214ENST00000550893 GPR20Q99678 358 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 CHMP4AQ9BY43 222 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 ZDHHC5Q9C0B5 715 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 ANKRD2Q9GZV1 360 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 OR10A5Q9H207 317 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 C9orf78Q9NZ63 289 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-214ENST00000550893 ASB1Q9Y576 335 aa6.03□□□□□ -1.44
SCAF11-214ENST00000550893 RANBP2P49792 3224 aaKnown RBP6.02□□□□□ -1.45
SCAF11-214ENST00000550893 AK9Q5TCS8 1911 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 CIAO1O76071 339 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 HSP90B1P14625 803 aaKnown RBP6.02□□□□□ -1.45
SCAF11-214ENST00000550893 ZNF20P17024 532 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 PHKA1P46020 1223 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 KCNQ1P51787 676 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 PABPC4Q13310 644 aaKnown RBP eCLIP6.02□□□□□ -1.45
SCAF11-214ENST00000550893 ARHGAP44Q17R89 818 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 TTLL5Q6EMB2 1281 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 CC2D1AQ6P1N0 951 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-214ENST00000550893 CHST14Q8NCH0 376 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 DNERQ8NFT8 737 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 WDR48Q8TAF3 677 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 ERCC4Q92889 916 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-214ENST00000550893 LMF1Q96S06 567 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 MPHOSPH8Q99549 860 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 R3HDMLQ9H3Y0 253 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 SEC61A2Q9H9S3 476 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 CD248Q9HCU0 757 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 FBXO10Q9UK96 956 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 CDC42EP3Q9UKI2 254 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 DOCK3Q8IZD9 2030 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 RPAP1Q9BWH6 1393 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-214ENST00000550893 A0A0G2JMZ2 1700 aa6.02□□□□□ -1.45
SCAF11-214ENST00000550893 MROH5Q6ZUA9 1318 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 MYO3BQ8WXR4 1341 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 MYH8P13535 1937 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 CLRN2A0PK11 232 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 DVL2O14641 736 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 PLIN1O60240 522 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 RFPL3O75679 317 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 INSRRP14616 1297 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 PRDX5P30044 214 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 NOLC1Q14978 699 aaKnown RBP eCLIP6.01□□□□□ -1.45
SCAF11-214ENST00000550893 EIF4HQ15056 248 aaKnown RBP6.01□□□□□ -1.45
SCAF11-214ENST00000550893 RNF151Q2KHN1 245 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 ZXDCQ2QGD7 858 aaPredicted RBP6.01□□□□□ -1.45
SCAF11-214ENST00000550893 CCDC57Q2TAC2 916 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 DEFB115Q30KQ5 88 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 CFAP100Q494V2 611 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 PIK3R6Q5UE93 754 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 APOBEC3HQ6NTF7 200 aaKnown RBP6.01□□□□□ -1.45
SCAF11-214ENST00000550893 LARP4Q71RC2 724 aaKnown RBP eCLIP6.01□□□□□ -1.45
SCAF11-214ENST00000550893 OTOP2Q7RTS6 562 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 SSH3Q8TE77 659 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 FOXRED1Q96CU9 486 aaPredicted RBP6.01□□□□□ -1.45
SCAF11-214ENST00000550893 CLMNQ96JQ2 1002 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 GNRHR2Q96P88 292 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 LRRC37BQ96QE4 947 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 C1QTNF3Q9BXJ4 246 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 API5Q9BZZ5 524 aaKnown RBP6.01□□□□□ -1.45
SCAF11-214ENST00000550893 SIL1Q9H173 461 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms