RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 DCLRE1CQ96SD1 692 aaKnown RBP3.86□□□□□ -1.79
CCNT1-203ENST00000550457 ADAM2Q99965 735 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 MSRAQ9UJ68 235 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 HDAC5Q9UQL6 1122 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 ATP6V1DQ9Y5K8 247 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.86□□□□□ -1.79
CCNT1-203ENST00000550457 MORC2Q9Y6X9 1032 aaPredicted RBP3.86□□□□□ -1.79
CCNT1-203ENST00000550457 PBRM1Q86U86 1689 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 MAGI1Q96QZ7 1491 aaPredicted RBP3.86□□□□□ -1.79
CCNT1-203ENST00000550457 URB2Q14146 1524 aaKnown RBP3.85□□□□□ -1.79
CCNT1-203ENST00000550457 ADAMTS12P58397 1594 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 TTC37Q6PGP7 1564 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 MAST1Q9Y2H9 1570 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 GAGE12BA1L429 117 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 PRSS38A1L453 326 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 GAGE12HA6NDE8 117 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 SMTNL1A8MU46 457 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 PRR5-ARHGAP8B1AHC4 643 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 CAVIN2O95810 425 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 F2P00734 622 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 TUBB4AP04350 444 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 TRIM27P14373 513 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 CD40P25942 277 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 CD38P28907 300 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 FLT3P36888 993 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 PLA2G5P39877 138 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 ATXN1P54253 815 aaKnown RBP3.85□□□□□ -1.79
CCNT1-203ENST00000550457 ANAPC15P60006 121 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 KRTAP10-11P60412 298 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 CBX1P83916 185 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 DSG1Q02413 1049 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 MGAT5Q09328 741 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 DHX8Q14562 1220 aaKnown RBP3.85□□□□□ -1.79
CCNT1-203ENST00000550457 UBE3CQ15386 1083 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 PRR16Q569H4 304 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 SOGA3Q5TF21 947 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 METRNLQ641Q3 311 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 FBXO42Q6P3S6 717 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 CTR9Q6PD62 1173 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 ESPNLQ6ZVH7 1005 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 ZNF771Q7L3S4 317 aaPredicted RBP3.85□□□□□ -1.79
CCNT1-203ENST00000550457 MORC1Q86VD1 984 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 ITPRIPQ8IWB1 547 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 LCORLQ8N3X6 602 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 EFHBQ8N7U6 833 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 FAM98AQ8NCA5 519 aaKnown RBP3.85□□□□□ -1.79
CCNT1-203ENST00000550457 CPEB3Q8NE35 698 aaKnown RBP3.85□□□□□ -1.79
CCNT1-203ENST00000550457 OR10H5Q8NGA6 315 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 KIAA1524Q8TCG1 905 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 GPT2Q8TD30 523 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 GAB3Q8WWW8 586 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 PRDM12Q9H4Q4 367 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 YY1AP1Q9H869 796 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 SPON1Q9HCB6 807 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 SMC4Q9NTJ3 1288 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 THG1LQ9NWX6 298 aaKnown RBP3.85□□□□□ -1.79
CCNT1-203ENST00000550457 USP36Q9P275 1121 aaKnown RBP3.85□□□□□ -1.79
CCNT1-203ENST00000550457 TMPRSS11EQ9UL52 423 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 PIK3R4Q99570 1358 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 NOS1P29475 1434 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 PLB1Q6P1J6 1458 aa3.85□□□□□ -1.79
CCNT1-203ENST00000550457 IQGAP3Q86VI3 1631 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 IQGAP1P46940 1657 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 SYCE3A1L190 88 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 PIPSLA2A3N6 862 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 MARCH11A6NNE9 402 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 INO80B-WBP1J3KQ70 363 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 KIF2AO00139 706 aaPredicted RBP3.84□□□□□ -1.79
CCNT1-203ENST00000550457 TULP2O00295 520 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 NEMFO60524 1076 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 KPNA6O60684 536 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 RFPL3O75679 317 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 MCCP23508 829 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 PABPC4Q13310 644 aaKnown RBP eCLIP3.84□□□□□ -1.79
CCNT1-203ENST00000550457 TP53BP2Q13625 1128 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 ATP2B3Q16720 1220 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 CCDC183Q5T5S1 534 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 DRICH1Q6PGQ1 229 aaPredicted RBP3.84□□□□□ -1.79
CCNT1-203ENST00000550457 PLXDC1Q8IUK5 500 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 KRT222Q8N1A0 295 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 ASB10Q8WXI3 467 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 FERMT2Q96AC1 680 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 COQ10AQ96MF6 247 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 NEU1Q99519 415 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 INO80BQ9C086 356 aaPredicted RBP3.84□□□□□ -1.79
CCNT1-203ENST00000550457 MTFR1LQ9H019 292 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 OSBPL2Q9H1P3 480 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 IFT57Q9NWB7 429 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 CTNNA3Q9UI47 895 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 MAP3K2Q9Y2U5 619 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 SPATA31A6Q5VVP1 1343 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 PTPRTO14522 1441 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 PPIP5K1Q6PFW1 1433 aa3.84□□□□□ -1.79
CCNT1-203ENST00000550457 MED14O60244 1454 aa3.84□□□□□ -1.8
CCNT1-203ENST00000550457 ERCC6Q03468 1493 aa3.84□□□□□ -1.8
CCNT1-203ENST00000550457 ZNF518AQ6AHZ1 1483 aa3.84□□□□□ -1.8
CCNT1-203ENST00000550457 CFAP74Q9C0B2 1584 aa3.84□□□□□ -1.8
CCNT1-203ENST00000550457 TARBP1Q13395 1621 aaKnown RBP3.84□□□□□ -1.8
CCNT1-203ENST00000550457 KIAA1210Q9ULL0 1709 aa3.84□□□□□ -1.8
CCNT1-203ENST00000550457 ATP8B1O43520 1251 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms