RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 WNT16Q9UBV4 365 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 PARP2Q9UGN5 583 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 CACNA1IQ9P0X4 2223 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 WDR81Q562E7 1941 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 ARID2Q68CP9 1835 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 PTGESO14684 152 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 MED24O75448 989 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 TADA2AO75478 443 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 ZMYND10O75800 440 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 SRFP11831 508 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 CYP11B2P19099 503 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 RFX1P22670 979 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 RPA1P27694 616 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 MCM7P33993 719 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 ST3GAL1Q11201 340 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 ELAVL2Q12926 359 aaKnown RBP8.41□□□□□ -1.06
NEK3-201ENST00000550331 PRPF4BQ13523 1007 aaKnown RBP8.41□□□□□ -1.06
NEK3-201ENST00000550331 PPP2R5AQ15172 486 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 RTP2Q5QGT7 225 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 HAUS3Q68CZ6 603 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 PDXDC1Q6P996 788 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 MAEAQ7L5Y9 396 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 PALB2Q86YC2 1186 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 RIN2Q8WYP3 895 aaPredicted RBP8.41□□□□□ -1.06
NEK3-201ENST00000550331 PIK3R5Q8WYR1 880 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 B3GALT6Q96L58 329 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 ADPGKQ9BRR6 497 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 TTPALQ9BTX7 342 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 CCDC113Q9H0I3 377 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 PDZD7Q9H5P4 517 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 PIDD1Q9HB75 910 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.41□□□□□ -1.06
NEK3-201ENST00000550331 KLK14Q9P0G3 267 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 FBXW11Q9UKB1 542 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 ZFP37Q9Y6Q3 630 aaPredicted RBP8.41□□□□□ -1.06
NEK3-201ENST00000550331 MIA3Q5JRA6 1907 aa8.41□□□□□ -1.06
NEK3-201ENST00000550331 A0A087WWV3 80 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 ARHGEF35A5YM69 484 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 ANHXE9PGG2 379 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 ACKR2O00590 384 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 SIAH2O43255 324 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 NARSO43776 548 aaKnown RBP8.4□□□□□ -1.06
NEK3-201ENST00000550331 RECQL4O94761 1208 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 KIF4AO95239 1232 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 THP07101 528 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 POU2F2P09086 479 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 HNRNPA1P09651 372 aaKnown RBP eCLIP8.4□□□□□ -1.06
NEK3-201ENST00000550331 OR52Z1P0C646 297 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 SPATA31D3P0C874 917 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 LAMP2P13473 410 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 RPL17P18621 184 aaKnown RBP8.4□□□□□ -1.06
NEK3-201ENST00000550331 HOXA9P31269 272 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 NAMPTP43490 491 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 EFNA5P52803 228 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 FAM171A1Q5VUB5 890 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 RNF19BQ6ZMZ0 732 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 SPATA31D4Q6ZUB0 917 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 GET4Q7L5D6 327 aaPredicted RBP8.4□□□□□ -1.06
NEK3-201ENST00000550331 APBB1IPQ7Z5R6 666 aaPredicted RBP8.4□□□□□ -1.06
NEK3-201ENST00000550331 SLC44A3Q8N4M1 653 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 RSAD2Q8WXG1 361 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 BSNDQ8WZ55 320 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 RUBCNQ92622 972 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 RABGGTAQ92696 567 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 MYADMQ96S97 322 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 PAAF1Q9BRP4 392 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 LLPHQ9BRT6 129 aaKnown RBP8.4□□□□□ -1.06
NEK3-201ENST00000550331 FOXP1Q9H334 677 aaPredicted RBP8.4□□□□□ -1.06
NEK3-201ENST00000550331 DLL3Q9NYJ7 618 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 CACNG4Q9UBN1 327 aa8.4□□□□□ -1.06
NEK3-201ENST00000550331 ZFHX4Q86UP3 3567 aa8.4□□□□□ -1.07
NEK3-201ENST00000550331 DOCK8Q8NF50 2099 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 PHLPP2Q6ZVD8 1323 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 GPR179Q6PRD1 2367 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 CASTOR2A6NHX0 329 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 TMEM189-UBE2V1I3L0A0 370 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 PRKCBP05771 671 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 MYBP10242 640 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 TRAPPC10P48553 1259 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 RBM25P49756 843 aaKnown RBP8.39□□□□□ -1.07
NEK3-201ENST00000550331 HMGN5P82970 282 aaKnown RBP8.39□□□□□ -1.07
NEK3-201ENST00000550331 GUCY1B3Q02153 619 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 HTR4Q13639 388 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 NAB2Q15742 525 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 PSMD5Q16401 504 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 TMEM132AQ24JP5 1023 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 RSPO4Q2I0M5 234 aaPredicted RBP8.39□□□□□ -1.07
NEK3-201ENST00000550331 DCAF4L1Q3SXM0 396 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 TTC38Q5R3I4 469 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 LIN9Q5TKA1 542 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 PHLDB3Q6NSJ2 640 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 MRPL14Q6P1L8 145 aaKnown RBP8.39□□□□□ -1.07
NEK3-201ENST00000550331 ZC3H14Q6PJT7 736 aaKnown RBP8.39□□□□□ -1.07
NEK3-201ENST00000550331 PRSS55Q6UWB4 352 aaPredicted RBP8.39□□□□□ -1.07
NEK3-201ENST00000550331 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.39□□□□□ -1.07
NEK3-201ENST00000550331 RTL10Q7L3V2 364 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 GLYCTKQ8IVS8 523 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 DCLK2Q8N568 766 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 FBXO18Q8NFZ0 1043 aa8.39□□□□□ -1.07
NEK3-201ENST00000550331 DEPTORQ8TB45 409 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms