RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 LILRA6Q6PI73 481 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 CRELD2Q6UXH1 353 aaPredicted RBP10.66□□□□□ -0.7
HDAC7-229ENST00000549883 PPFIBP1Q86W92 1011 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 KCNG4Q8TDN1 519 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 PIK3R5Q8WYR1 880 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 KIF12Q96FN5 646 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 DDX27Q96GQ7 796 aaKnown RBP10.66□□□□□ -0.7
HDAC7-229ENST00000549883 TRIM9Q9C026 710 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 GDPD2Q9HCC8 539 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 SERTAD1Q9UHV2 236 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 STYXL1Q9Y6J8 313 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 TSC2P49815 1807 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 A0A1B0GVL5 298 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 FSD2A1L4K1 749 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 GOLGA8IPA6NC78 632 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 GOLGA8JA6NMD2 632 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 C2CD4DB7Z1M9 353 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 PI4K2BG5E9Z4 385 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 GLUD1P00367 558 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 ADRB2P07550 413 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 AFMP43652 599 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 ASIC1P78348 528 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 PPP2R3AQ06190 1150 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 CUL4BQ13620 913 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 L1TD1Q5T7N2 865 aaKnown RBP10.65□□□□□ -0.7
HDAC7-229ENST00000549883 ADALQ6DHV7 355 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.65□□□□□ -0.7
HDAC7-229ENST00000549883 GPR149Q86SP6 731 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 IQUBQ8NA54 791 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 ZNF707Q96C28 371 aaPredicted RBP10.65□□□□□ -0.7
HDAC7-229ENST00000549883 SAAL1Q96ER3 474 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 UROC1Q96N76 676 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 CBWD1Q9BRT8 395 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 TNMDQ9H2S6 317 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 SMOC2Q9H3U7 446 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 SFXN1Q9H9B4 322 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 RPF1Q9H9Y2 349 aaKnown RBP10.65□□□□□ -0.7
HDAC7-229ENST00000549883 TSHZ2Q9NRE2 1034 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 OLFML3Q9NRN5 406 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 SLC38A7Q9NVC3 462 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 DZANK1Q9NVP4 752 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 FNIP2Q9P278 1114 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 SEL1LQ9UBV2 794 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 STK39Q9UEW8 545 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 AGO2Q9UKV8 859 aaKnown RBP10.65□□□□□ -0.7
HDAC7-229ENST00000549883 CFAP45Q9UL16 551 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 SSX2IPQ9Y2D8 614 aa10.65□□□□□ -0.7
HDAC7-229ENST00000549883 CCDC195A0A1B0GUA6 201 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 SPDYE4A6NLX3 237 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 SPTLC1O15269 473 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 ACTN4O43707 911 aaKnown RBP10.64□□□□□ -0.71
HDAC7-229ENST00000549883 N4BP1O75113 896 aaKnown RBP10.64□□□□□ -0.71
HDAC7-229ENST00000549883 PDIA4P13667 645 aaKnown RBP10.64□□□□□ -0.71
HDAC7-229ENST00000549883 PFKFB1P16118 471 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 OR1D2P34982 312 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 ITIH3Q06033 890 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 VARS2Q5ST30 1063 aaKnown RBP10.64□□□□□ -0.71
HDAC7-229ENST00000549883 ATL3Q6DD88 541 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 CES5AQ6NT32 575 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 CCDC65Q8IXS2 484 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 EFCAB13Q8IY85 973 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 KREMEN2Q8NCW0 462 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 ST13P5Q8NFI4 369 aaPredicted RBP10.64□□□□□ -0.71
HDAC7-229ENST00000549883 POMGNT1Q8WZA1 660 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 HVCN1Q96D96 273 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 SPATA32Q96LK8 384 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 ACCSQ96QU6 501 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 C7orf25Q9BPX7 421 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 GOLPH3LQ9H4A5 285 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 PCIF1Q9H4Z3 704 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 PLEKHA5Q9HAU0 1116 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 MTRRQ9UBK8 725 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 KCNH3Q9ULD8 1083 aa10.64□□□□□ -0.71
HDAC7-229ENST00000549883 TIMM13Q9Y5L4 95 aaPredicted RBP10.64□□□□□ -0.71
HDAC7-229ENST00000549883 TULP1O00294 542 aaPredicted RBP10.63□□□□□ -0.71
HDAC7-229ENST00000549883 ASGR2P07307 311 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 RPL9P32969 192 aaKnown RBP10.63□□□□□ -0.71
HDAC7-229ENST00000549883 MCM4P33991 863 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 CDR1P51861 262 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 KRT85P78386 507 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 NTHL1P78549 312 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 EHHADHQ08426 723 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 ELAVL2Q12926 359 aaKnown RBP10.63□□□□□ -0.71
HDAC7-229ENST00000549883 ATAT1Q5SQI0 421 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 SPATA1Q5VX52 437 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 CNNM4Q6P4Q7 775 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 EPM2AIP1Q7L775 607 aaPredicted RBP10.63□□□□□ -0.71
HDAC7-229ENST00000549883 GPR65Q8IYL9 337 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 PAGE5Q96GU1 130 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 SUSD3Q96L08 255 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 POP1Q99575 1024 aaKnown RBP10.63□□□□□ -0.71
HDAC7-229ENST00000549883 FAM213AQ9BRX8 229 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 LRFN3Q9BTN0 628 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 CUEDC2Q9H467 287 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.63□□□□□ -0.71
HDAC7-229ENST00000549883 FAM13BQ9NYF5 915 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 FBXW11Q9UKB1 542 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 HPSEQ9Y251 543 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 NUB1Q9Y5A7 615 aa10.63□□□□□ -0.71
HDAC7-229ENST00000549883 CDY1Q9Y6F8 540 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms