RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 VAMP1P23763 118 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 GJB2P29033 226 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 PRPHP41219 470 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 ALDH7A1P49419 539 aaKnown RBP7.35□□□□□ -1.23
TMEM116-208ENST00000549537 NDUFV1P49821 464 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 KRT17Q04695 432 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 DSC1Q08554 894 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 CLN3Q13286 438 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 FAM187BQ17R55 369 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 OXLD1Q5BKU9 147 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 HAUS3Q68CZ6 603 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 PHLDB3Q6NSJ2 640 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 NOTUMQ6P988 496 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 SYCE2Q6PIF2 218 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 DDX53Q86TM3 631 aaKnown RBP7.35□□□□□ -1.23
TMEM116-208ENST00000549537 MRPL43Q8N983 215 aaKnown RBP7.35□□□□□ -1.23
TMEM116-208ENST00000549537 CNNM3Q8NE01 707 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 GSTCDQ8NEC7 633 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 ERMNQ8TAM6 284 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 MICAL1Q8TDZ2 1067 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 SUSD6Q92537 303 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 PGBD4Q96DM1 585 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 CCDC113Q9H0I3 377 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 S1PR5Q9H228 398 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 NXF3Q9H4D5 531 aaKnown RBP7.35□□□□□ -1.23
TMEM116-208ENST00000549537 RSAD1Q9HA92 442 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 ENTPD7Q9NQZ7 604 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 MIOSQ9NXC5 875 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 LRWD1Q9UFC0 647 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 PUF60Q9UHX1 559 aaKnown RBP7.35□□□□□ -1.23
TMEM116-208ENST00000549537 NOVA2Q9UNW9 492 aaKnown RBP7.35□□□□□ -1.23
TMEM116-208ENST00000549537 FAM50BQ9Y247 325 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 INPP5FQ9Y2H2 1132 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 HES2Q9Y543 173 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 IRAK3Q9Y616 596 aa7.35□□□□□ -1.23
TMEM116-208ENST00000549537 ZMYM2Q9UBW7 1377 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 CLASP2O75122 1294 aaKnown RBP7.34□□□□□ -1.23
TMEM116-208ENST00000549537 CTSAP10619 480 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 CCT6AP40227 531 aaKnown RBP7.34□□□□□ -1.23
TMEM116-208ENST00000549537 MCM2P49736 904 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 ATP1A2P50993 1020 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 ATP2C1P98194 919 aaPredicted RBP7.34□□□□□ -1.23
TMEM116-208ENST00000549537 GNL2Q13823 731 aaKnown RBP7.34□□□□□ -1.23
TMEM116-208ENST00000549537 SMC1AQ14683 1233 aaKnown RBP7.34□□□□□ -1.23
TMEM116-208ENST00000549537 LBRQ14739 615 aaKnown RBP7.34□□□□□ -1.23
TMEM116-208ENST00000549537 HYIQ5T013 277 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 ANKRD54Q6NXT1 300 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 SLC27A1Q6PCB7 646 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 MAEAQ7L5Y9 396 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 TMC7Q7Z402 723 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 KCNK18Q7Z418 384 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 CDR2LQ86X02 465 aaPredicted RBP7.34□□□□□ -1.23
TMEM116-208ENST00000549537 COLGALT2Q8IYK4 626 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 RNF168Q8IYW5 571 aaPredicted RBP7.34□□□□□ -1.23
TMEM116-208ENST00000549537 DAW1Q8N136 415 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 VPS52Q8N1B4 723 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 URGCPQ8TCY9 931 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 TMEM169Q96HH4 297 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 PRIMPOLQ96LW4 560 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 CCDC43Q96MW1 224 aaKnown RBP7.34□□□□□ -1.23
TMEM116-208ENST00000549537 GAD1Q99259 594 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 TMEM175Q9BSA9 504 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 BHMT2Q9H2M3 363 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 UBN1Q9NPG3 1134 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 PRMT7Q9NVM4 692 aaPredicted RBP7.34□□□□□ -1.23
TMEM116-208ENST00000549537 MARCH5Q9NX47 278 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 KANSL3Q9P2N6 904 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 ZMIZ1Q9ULJ6 1067 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 KIAA1024Q9UPX6 916 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 KIF3AQ9Y496 699 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 USP15Q9Y4E8 981 aaPredicted RBP7.34□□□□□ -1.23
TMEM116-208ENST00000549537 PCDHB11Q9Y5F2 797 aa7.34□□□□□ -1.23
TMEM116-208ENST00000549537 TDRD15B5MCY1 1934 aaKnown RBP7.34□□□□□ -1.23
TMEM116-208ENST00000549537 ZFHX2Q9C0A1 2572 aaPredicted RBP7.34□□□□□ -1.23
TMEM116-208ENST00000549537 ARHGEF35A5YM69 484 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 LRRIQ4A6NIV6 560 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 LOC730098B7Z3J9 87 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 E9PMD0 336 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 F8W810 466 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 NRP1O14786 923 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 NPTXRO95502 500 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 CXCL14O95715 111 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 RECKO95980 971 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 POMCP01189 267 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 ITGA4P13612 1032 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 CDC25AP30304 524 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 MLH1P40692 756 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 NAMPTP43490 491 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 SCNN1GP51170 649 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 RNASELQ05823 741 aaKnown RBP7.33□□□□□ -1.24
TMEM116-208ENST00000549537 USP4Q13107 963 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 MAPK7Q13164 816 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 CUL4AQ13619 759 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 CBX2Q14781 532 aaPredicted RBP7.33□□□□□ -1.24
TMEM116-208ENST00000549537 PTPN14Q15678 1187 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 CRTC2Q53ET0 693 aaPredicted RBP7.33□□□□□ -1.24
TMEM116-208ENST00000549537 RILPL1Q5EBL4 403 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 TMEM31Q5JXX7 168 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 SNX29Q8TEQ0 813 aa7.33□□□□□ -1.24
TMEM116-208ENST00000549537 SLC22A17Q8WUG5 538 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms