RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 IKZF4Q9H2S9 585 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 SAMSN1Q9NSI8 373 aaKnown RBP10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 INPP5FQ9Y2H2 1132 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 GOLGA6L3A6NEY3 463 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 LRRIQ3A6PVS8 624 aaPredicted RBP10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 TBKBP1A7MCY6 615 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 LGALS16A8MUM7 142 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 TMEM189-UBE2V1I3L0A0 370 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 TRAPPC3O43617 180 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 GABBR2O75899 941 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 UPP2O95045 317 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 STAU1O95793 577 aaKnown RBP10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 ALDH2P05091 517 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 IBSPP21815 317 aaPredicted RBP10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 PIK3CAP42336 1068 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 ALDH7A1P49419 539 aaKnown RBP10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 SCNN1GP51170 649 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 COPB1P53618 953 aaKnown RBP10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 DEFB103AP81534 67 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 MYL7Q01449 175 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 BTG3Q14201 252 aaPredicted RBP10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 BMS1Q14692 1282 aaKnown RBP10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 KRT31Q15323 416 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 ZBTB6Q15916 424 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 ZACNQ401N2 412 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 SV2CQ496J9 727 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 SEZ6Q53EL9 994 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 WDR44Q5JSH3 913 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 CLLU1OSQ5K130 101 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 ZBTB41Q5SVQ8 909 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 SPOUT1Q5T280 376 aaKnown RBP10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 SARM1Q6SZW1 724 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 GBP6Q6ZN66 633 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 IRF2BP1Q8IU81 584 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 TMEM192Q8IY95 271 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 TDHQ8IZJ6 230 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 FIBCD1Q8N539 461 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 TTC39CQ8N584 583 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 FBXL13Q8NEE6 735 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 SPATA18Q8TC71 538 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 LPPQ93052 612 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 SLC35C1Q96A29 364 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 ZNF689Q96CS4 500 aaPredicted RBP10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 CASD1Q96PB1 797 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 MED15Q96RN5 788 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 COLEC11Q9BWP8 271 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 NDST4Q9H3R1 872 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 DPP3Q9NY33 737 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 KLK14Q9P0G3 267 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 COQ4Q9Y3A0 265 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 PCDHB12Q9Y5F1 795 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 PCDHA11Q9Y5I1 949 aa10.54□□□□□ -0.72
SMARCD1-206ENST00000549274 PTPRSQ13332 1948 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 C19orf67A6NJJ6 358 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 PTGESO14684 152 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 C4BPAP04003 597 aaKnown RBP10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 FGFR1P11362 822 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 FMO5P49326 533 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 EPHB4P54760 987 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 UBASH3AP57075 661 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 YWHAEP62258 255 aaKnown RBP10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 FANCCQ00597 558 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 DSC1Q08554 894 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 NCOA4Q13772 614 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 EXOC3L4Q17RC7 722 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 TCTN1Q2MV58 587 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 SGSM1Q2NKQ1 1148 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 DCLRE1AQ6PJP8 1040 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 SV2AQ7L0J3 742 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 ENOSF1Q7L5Y1 443 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 TRAPPC11Q7Z392 1133 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 EFCAB13Q8IY85 973 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 RNF214Q8ND24 703 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 EEF2KMTQ96G04 330 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 ZFP42Q96MM3 310 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 ZNF558Q96NG5 402 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 PLVAPQ9BX97 442 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 MTMR12Q9C0I1 747 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 VRTNQ9H8Y1 702 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 TBC1D13Q9NVG8 400 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 MSRAQ9UJ68 235 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 SSUH2Q9Y2M2 353 aa10.53□□□□□ -0.72
SMARCD1-206ENST00000549274 A0A1W2PQC6 194 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 ANO9A1A5B4 782 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 GOLGA6L6A8MZA4 724 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 CLSTN1O94985 981 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 POMCP01189 267 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 NFICP08651 508 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 TPM1P09493 284 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 FAM163BP0C2L3 166 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 TRIM49P0CI25 452 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 TRIM49CP0CI26 452 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 TBXAS1P24557 533 aaPredicted RBP10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 TAF6P49848 677 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 UBXN1Q04323 297 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 TRIM14Q14142 442 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 SHHQ15465 462 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 GLRA4Q5JXX5 417 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms