RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 PRPHP41219 470 aa14.09□□□□□ -0.15
PTCH1-218ENST00000548945 PEX3P56589 373 aa14.09□□□□□ -0.15
PTCH1-218ENST00000548945 SOX4Q06945 474 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-218ENST00000548945 ZNF568Q3ZCX4 644 aa14.09□□□□□ -0.15
PTCH1-218ENST00000548945 DAW1Q8N136 415 aa14.09□□□□□ -0.15
PTCH1-218ENST00000548945 FAM184AQ8NB25 1140 aa14.09□□□□□ -0.15
PTCH1-218ENST00000548945 ST13P5Q8NFI4 369 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-218ENST00000548945 SNX29Q8TEQ0 813 aa14.09□□□□□ -0.15
PTCH1-218ENST00000548945 NELL2Q99435 816 aa14.09□□□□□ -0.15
PTCH1-218ENST00000548945 TIPINQ9BVW5 301 aa14.09□□□□□ -0.15
PTCH1-218ENST00000548945 GOLGA2P5Q9HBQ8 144 aa14.09□□□□□ -0.15
PTCH1-218ENST00000548945 POLD4Q9HCU8 107 aa14.09□□□□□ -0.15
PTCH1-218ENST00000548945 KCNG1Q9UIX4 513 aa14.09□□□□□ -0.15
PTCH1-218ENST00000548945 FBXO4Q9UKT5 387 aa14.09□□□□□ -0.15
PTCH1-218ENST00000548945 MAFFQ9ULX9 164 aa14.09□□□□□ -0.15
PTCH1-218ENST00000548945 H7C4K7 107 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 PODXLO00592 558 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 LRG1P02750 347 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 ATF2P15336 505 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 PTPN2P17706 415 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 IGFBP6P24592 240 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-218ENST00000548945 ELF1P32519 619 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 BRCC3P46736 316 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 ROR1Q01973 937 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 PTGDRQ13258 359 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 MRPL58Q14197 206 aaKnown RBP14.08□□□□□ -0.16
PTCH1-218ENST00000548945 VARS2Q5ST30 1063 aaKnown RBP14.08□□□□□ -0.16
PTCH1-218ENST00000548945 KRT79Q5XKE5 535 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 TPGS2Q68CL5 300 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 TAS1R3Q7RTX0 852 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 TCEAL8Q8IYN2 117 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 MAML2Q8IZL2 1156 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-218ENST00000548945 KCTD17Q8N5Z5 321 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 CEP120Q8N960 986 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 RUBCNQ92622 972 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 ACAP3Q96P50 834 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 KXD1Q9BQD3 176 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 NTPCRQ9BSD7 190 aaKnown RBP14.08□□□□□ -0.16
PTCH1-218ENST00000548945 LTB4R2Q9NPC1 389 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 KMT5AQ9NQR1 393 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 CNTN3Q9P232 1028 aa14.08□□□□□ -0.16
PTCH1-218ENST00000548945 FAM170BA6NMN3 283 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 I3L4J1 428 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 ABLIM1O14639 778 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 PRRG1O14668 218 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 ZNF197O14709 1029 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 SPTLC1O15269 473 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 NCAM2O15394 837 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 LAMTOR5O43504 91 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 HIP1RO75146 1068 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 GUCY2CP25092 1073 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 RPS9P46781 194 aaKnown RBP14.07□□□□□ -0.16
PTCH1-218ENST00000548945 TOB1P50616 345 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-218ENST00000548945 MAPK7Q13164 816 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 NBR1Q14596 966 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 UBXN2BQ14CS0 331 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 SLC5A9Q2M3M2 681 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 ZBTB41Q5SVQ8 909 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 RINT1Q6NUQ1 792 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 MPZL3Q6UWV2 235 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 C1orf186Q6ZWK4 172 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 SPIRE2Q8WWL2 714 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 ING5Q8WYH8 240 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 DNASE1L2Q92874 299 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 CLDN23Q96B33 292 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 ELSPBP1Q96BH3 223 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 ZMAT2Q96NC0 199 aaKnown RBP14.07□□□□□ -0.16
PTCH1-218ENST00000548945 TARS2Q9BW92 718 aaKnown RBP14.07□□□□□ -0.16
PTCH1-218ENST00000548945 SPATA6Q9NWH7 488 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-218ENST00000548945 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-218ENST00000548945 SPTBN2O15020 2390 aa14.07□□□□□ -0.16
PTCH1-218ENST00000548945 WDR27A2RRH5 827 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 E9PMD0 336 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 KINO60870 393 aaKnown RBP14.06□□□□□ -0.16
PTCH1-218ENST00000548945 LRRN2O75325 713 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 TOM1L1O75674 476 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 SEC24BO95487 1268 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 OSTNP61366 133 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 PRSS36Q5K4E3 855 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 ZNF852Q6ZMS4 543 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 APPL2Q8NEU8 664 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 MCRS1Q96EZ8 462 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 SUSD3Q96L08 255 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 TCHPQ9BT92 498 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 RUSC1Q9BVN2 902 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 FBXL5Q9UKA1 691 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 MRPS17Q9Y2R5 130 aaKnown RBP14.06□□□□□ -0.16
PTCH1-218ENST00000548945 NUB1Q9Y5A7 615 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 PCDHB6Q9Y5E3 794 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 PCDHGA2Q9Y5H1 932 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 INSL5Q9Y5Q6 135 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 COL4A3Q01955 1670 aa14.06□□□□□ -0.16
PTCH1-218ENST00000548945 TPRP12270 2363 aaKnown RBP14.05□□□□□ -0.16
PTCH1-218ENST00000548945 CEBPBP17676 345 aa14.05□□□□□ -0.16
PTCH1-218ENST00000548945 SMTNP53814 917 aa14.05□□□□□ -0.16
PTCH1-218ENST00000548945 STRN3Q13033 797 aa14.05□□□□□ -0.16
PTCH1-218ENST00000548945 NOLC1Q14978 699 aaKnown RBP eCLIP14.05□□□□□ -0.16
PTCH1-218ENST00000548945 HYIQ5T013 277 aa14.05□□□□□ -0.16
PTCH1-218ENST00000548945 ZNF280DQ6N043 979 aa14.05□□□□□ -0.16
PTCH1-218ENST00000548945 ZPBP2Q6X784 338 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms