RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 ARSHQ5FYA8 562 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 VARS2Q5ST30 1063 aaKnown RBP19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 ITFG1Q8TB96 612 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 FGF13Q92913 245 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 FGF14Q92915 247 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 KCNN1Q92952 543 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 AK8Q96MA6 479 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 TBC1D32Q96NH3 1257 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 RTP3Q9BQQ7 232 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 UPF2Q9HAU5 1272 aaKnown RBP19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 SLC2A4RGQ9NR83 387 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 CA14Q9ULX7 337 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 POLIQ9UNA4 740 aa19.02■□□□□ 0.64
CHMP1A-205ENST00000548650 ANK1P16157 1881 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 SYN3O14994 580 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 SLC26A4O43511 780 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 NBL1P41271 181 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 SMTNP53814 917 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 MCL1Q07820 350 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 SLC10A6Q3KNW5 377 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 PARM1Q6UWI2 310 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 RTL10Q7L3V2 364 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 NPAS3Q8IXF0 933 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 REEP2Q9BRK0 252 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 RPP25Q9BUL9 199 aaKnown RBP19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 HAPLN2Q9GZV7 340 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 TBC1D17Q9HA65 648 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 ARHGEF3Q9NR81 526 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 DNMT3BQ9UBC3 853 aaKnown RBP19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 TUBGCP4Q9UGJ1 667 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 KCNG1Q9UIX4 513 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 DMDP11532 3685 aa19.01■□□□□ 0.63
CHMP1A-205ENST00000548650 FAM186AA6NE01 2351 aa19■□□□□ 0.63
CHMP1A-205ENST00000548650 RIF1Q5UIP0 2472 aaKnown RBP19■□□□□ 0.63
CHMP1A-205ENST00000548650 WDR27A2RRH5 827 aa19■□□□□ 0.63
CHMP1A-205ENST00000548650 TBC1D4O60343 1298 aa19■□□□□ 0.63
CHMP1A-205ENST00000548650 CXCL8P10145 99 aa19■□□□□ 0.63
CHMP1A-205ENST00000548650 RPL9P32969 192 aaKnown RBP19■□□□□ 0.63
CHMP1A-205ENST00000548650 PABPC1LQ4VXU2 614 aaKnown RBP19■□□□□ 0.63
CHMP1A-205ENST00000548650 SUSD3Q96L08 255 aa19■□□□□ 0.63
CHMP1A-205ENST00000548650 BLOC1S4Q9NUP1 217 aa19■□□□□ 0.63
CHMP1A-205ENST00000548650 LARSQ9P2J5 1176 aaKnown RBP19■□□□□ 0.63
CHMP1A-205ENST00000548650 ODF2LQ9ULJ1 636 aa19■□□□□ 0.63
CHMP1A-205ENST00000548650 NUB1Q9Y5A7 615 aa19■□□□□ 0.63
CHMP1A-205ENST00000548650 ARHGEF37A1IGU5 675 aa18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 ABLIM3O94929 683 aa18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 GRIN1Q05586 938 aa18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 MRPL58Q14197 206 aaKnown RBP18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 SLC5A9Q2M3M2 681 aa18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 LARP1BQ659C4 914 aaKnown RBP18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 GPBP1Q86WP2 473 aa18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 TMEM130Q8N3G9 435 aa18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 DTWD2Q8NBA8 298 aa18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 ZNF461Q8TAF7 563 aa18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 FBXL5Q9UKA1 691 aa18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 KCNH3Q9ULD8 1083 aa18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 PATJQ8NI35 1801 aa18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 VPS13AQ96RL7 3174 aa18.99■□□□□ 0.63
CHMP1A-205ENST00000548650 H0YCG3 227 aa18.98■□□□□ 0.63
CHMP1A-205ENST00000548650 CLDN3O15551 220 aa18.98■□□□□ 0.63
CHMP1A-205ENST00000548650 FAM189A1O60320 539 aa18.98■□□□□ 0.63
CHMP1A-205ENST00000548650 BMP15O95972 392 aa18.98■□□□□ 0.63
CHMP1A-205ENST00000548650 PLCG1P19174 1290 aa18.98■□□□□ 0.63
CHMP1A-205ENST00000548650 MCM4P33991 863 aa18.98■□□□□ 0.63
CHMP1A-205ENST00000548650 ZNF131P52739 623 aa18.98■□□□□ 0.63
CHMP1A-205ENST00000548650 ANGPT1Q15389 498 aa18.98■□□□□ 0.63
CHMP1A-205ENST00000548650 MTSS1LQ765P7 747 aa18.98■□□□□ 0.63
CHMP1A-205ENST00000548650 ASCL5Q7RTU5 278 aa18.98■□□□□ 0.63
CHMP1A-205ENST00000548650 HAUS6Q7Z4H7 955 aa18.98■□□□□ 0.63
CHMP1A-205ENST00000548650 BRAPQ7Z569 592 aa18.98■□□□□ 0.63
CHMP1A-205ENST00000548650 ING5Q8WYH8 240 aa18.98■□□□□ 0.63
CHMP1A-205ENST00000548650 GVINP1Q7Z2Y8 2422 aa18.98■□□□□ 0.63
CHMP1A-205ENST00000548650 COL4A2P08572 1712 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 FANCMQ8IYD8 2048 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 TTC26A0AVF1 554 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 PRR23AA6NEV1 266 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 H7C4K7 107 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 K7ENM7 598 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 PIGRP01833 764 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 RHOP08100 348 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 CLTAP09496 248 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 ATF2P15336 505 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 RFX1P22670 979 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 UBA7P41226 1012 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 TNFSF9P41273 254 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 SPAG1Q07617 926 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 KARSQ15046 597 aaKnown RBP18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 ZBTB41Q5SVQ8 909 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 ZNF280DQ6N043 979 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 PHLDB3Q6NSJ2 640 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 FRMD5Q7Z6J6 570 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 BICD1Q96G01 975 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 CALML4Q96GE6 196 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 AVENQ9NQS1 362 aaPredicted RBP18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 INSL5Q9Y5Q6 135 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 CFAP54Q96N23 3096 aa18.97■□□□□ 0.63
CHMP1A-205ENST00000548650 HNRNPDLO14979 420 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 SEC24AO95486 1093 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 LRPAP1P30533 357 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms