RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 TRABDQ9H4I3 376 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 RBM26Q5T8P6 1007 aaKnown RBP24.56■■□□□ 1.52
NPAS3-206ENST00000548645 C12orf56Q8IXR9 622 aa24.56■■□□□ 1.52
NPAS3-206ENST00000548645 TMEM174Q8WUU8 243 aa24.56■■□□□ 1.52
NPAS3-206ENST00000548645 RBM15Q96T37 977 aaKnown RBP eCLIP24.56■■□□□ 1.52
NPAS3-206ENST00000548645 SENP1Q9P0U3 644 aa24.56■■□□□ 1.52
NPAS3-206ENST00000548645 H0Y3Z8 333 aa24.56■■□□□ 1.52
NPAS3-206ENST00000548645 SMIM24O75264 130 aa24.56■■□□□ 1.52
NPAS3-206ENST00000548645 SNUPNO95149 360 aaKnown RBP24.56■■□□□ 1.52
NPAS3-206ENST00000548645 PTPN4P29074 926 aa24.56■■□□□ 1.52
NPAS3-206ENST00000548645 ALCAMQ13740 583 aa24.56■■□□□ 1.52
NPAS3-206ENST00000548645 C10orf82Q8WW14 230 aa24.56■■□□□ 1.52
NPAS3-206ENST00000548645 KIFAP3Q92845 792 aa24.56■■□□□ 1.52
NPAS3-206ENST00000548645 HERPUD2Q9BSE4 406 aa24.56■■□□□ 1.52
NPAS3-206ENST00000548645 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.56■■□□□ 1.52
NPAS3-206ENST00000548645 R3HDM2Q9Y2K5 976 aaKnown RBP24.56■■□□□ 1.52
NPAS3-206ENST00000548645 PIK3CDO00329 1044 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 HNRNPCL1O60812 293 aaKnown RBP24.55■■□□□ 1.52
NPAS3-206ENST00000548645 SLURP2P0DP57 97 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 ADRA2BP18089 450 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 SLC1A1P43005 524 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 FAM98CQ17RN3 349 aaKnown RBP24.55■■□□□ 1.52
NPAS3-206ENST00000548645 RBBP8NLQ8NC74 664 aaPredicted RBP24.55■■□□□ 1.52
NPAS3-206ENST00000548645 CERKQ8TCT0 537 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 ACCSQ96QU6 501 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 SMC6Q96SB8 1091 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 CBWD1Q9BRT8 395 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 DENND2DQ9H6A0 471 aaPredicted RBP24.55■■□□□ 1.52
NPAS3-206ENST00000548645 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.55■■□□□ 1.52
NPAS3-206ENST00000548645 PRUNE1Q86TP1 453 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 TDRPQ86YL5 185 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 DAW1Q8N136 415 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 CFAP61Q8NHU2 1237 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 LARSQ9P2J5 1176 aaKnown RBP24.55■■□□□ 1.52
NPAS3-206ENST00000548645 WRAP73Q9P2S5 460 aaPredicted RBP24.55■■□□□ 1.52
NPAS3-206ENST00000548645 TISP43B9A030 160 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 F5H6K3 240 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 CBX6O95503 412 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 PECAM1P16284 738 aaPredicted RBP24.55■■□□□ 1.52
NPAS3-206ENST00000548645 MARK3P27448 753 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 INHBEP58166 350 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 CCNG2Q16589 344 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 MUM1Q2TAK8 710 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 SLC45A4Q5BKX6 768 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 CDC42EP5Q6NZY7 148 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 APBB1IPQ7Z5R6 666 aaPredicted RBP24.55■■□□□ 1.52
NPAS3-206ENST00000548645 ZCCHC9Q8N567 271 aaKnown RBP24.55■■□□□ 1.52
NPAS3-206ENST00000548645 TTC8Q8TAM2 541 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 TLE6Q9H808 572 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 HSPBP1Q9NZL4 362 aa24.55■■□□□ 1.52
NPAS3-206ENST00000548645 TAL1P17542 331 aaPredicted RBP24.54■■□□□ 1.52
NPAS3-206ENST00000548645 CERKLQ49MI3 558 aaPredicted RBP24.54■■□□□ 1.52
NPAS3-206ENST00000548645 FAM81BQ96LP2 452 aa24.54■■□□□ 1.52
NPAS3-206ENST00000548645 STOML1Q9UBI4 398 aa24.54■■□□□ 1.52
NPAS3-206ENST00000548645 TAF1LQ8IZX4 1826 aa24.54■■□□□ 1.52
NPAS3-206ENST00000548645 ENTPD5O75356 428 aa24.54■■□□□ 1.52
NPAS3-206ENST00000548645 KRT15P19012 456 aa24.54■■□□□ 1.52
NPAS3-206ENST00000548645 PAPOLAP51003 745 aaKnown RBP24.54■■□□□ 1.52
NPAS3-206ENST00000548645 PLEKHO2Q8TD55 490 aa24.54■■□□□ 1.52
NPAS3-206ENST00000548645 KIAA1586Q9HCI6 787 aa24.54■■□□□ 1.52
NPAS3-206ENST00000548645 SAR1AQ9NR31 198 aa24.54■■□□□ 1.52
NPAS3-206ENST00000548645 PAPOLBQ9NRJ5 636 aaKnown RBP24.54■■□□□ 1.52
NPAS3-206ENST00000548645 LNPEPQ9UIQ6 1025 aa24.54■■□□□ 1.52
NPAS3-206ENST00000548645 ZFP69BQ9UJL9 534 aa24.54■■□□□ 1.52
NPAS3-206ENST00000548645 UPP2O95045 317 aa24.53■■□□□ 1.52
NPAS3-206ENST00000548645 CCDC125Q86Z20 511 aa24.53■■□□□ 1.52
NPAS3-206ENST00000548645 SUPT20HQ8NEM7 779 aa24.53■■□□□ 1.52
NPAS3-206ENST00000548645 TTC25Q96NG3 672 aa24.53■■□□□ 1.52
NPAS3-206ENST00000548645 WDR11Q9BZH6 1224 aa24.53■■□□□ 1.52
NPAS3-206ENST00000548645 CNGA1P29973 690 aa24.53■■□□□ 1.52
NPAS3-206ENST00000548645 GNPTABQ3T906 1256 aa24.53■■□□□ 1.52
NPAS3-206ENST00000548645 TAF1BQ53T94 588 aaPredicted RBP24.53■■□□□ 1.52
NPAS3-206ENST00000548645 TMEM154Q6P9G4 183 aa24.53■■□□□ 1.52
NPAS3-206ENST00000548645 NRAPQ86VF7 1730 aa24.53■■□□□ 1.52
NPAS3-206ENST00000548645 LARGE2Q8N3Y3 721 aa24.53■■□□□ 1.52
NPAS3-206ENST00000548645 DDX27Q96GQ7 796 aaKnown RBP24.53■■□□□ 1.52
NPAS3-206ENST00000548645 MAPTP10636 758 aaKnown RBP24.52■■□□□ 1.52
NPAS3-206ENST00000548645 CA4P22748 312 aa24.52■■□□□ 1.52
NPAS3-206ENST00000548645 CLEC16AQ2KHT3 1053 aa24.52■■□□□ 1.52
NPAS3-206ENST00000548645 HHATQ5VTY9 493 aa24.52■■□□□ 1.52
NPAS3-206ENST00000548645 SYT15Q9BQS2 421 aa24.52■■□□□ 1.52
NPAS3-206ENST00000548645 HEMGNQ9BXL5 484 aa24.52■■□□□ 1.52
NPAS3-206ENST00000548645 VCXQ9H320 206 aa24.52■■□□□ 1.52
NPAS3-206ENST00000548645 CPSF2Q9P2I0 782 aaKnown RBP24.52■■□□□ 1.52
NPAS3-206ENST00000548645 KLHL33A6NCF5 533 aa24.52■■□□□ 1.52
NPAS3-206ENST00000548645 RALAP11233 206 aa24.52■■□□□ 1.52
NPAS3-206ENST00000548645 GCAP28676 217 aa24.52■■□□□ 1.52
NPAS3-206ENST00000548645 RXRBP28702 533 aa24.52■■□□□ 1.52
NPAS3-206ENST00000548645 KLF1Q13351 362 aaPredicted RBP24.52■■□□□ 1.52
NPAS3-206ENST00000548645 TEKT4Q8WW24 435 aa24.52■■□□□ 1.52
NPAS3-206ENST00000548645 RBM17Q96I25 401 aaKnown RBP24.52■■□□□ 1.52
NPAS3-206ENST00000548645 GMCL1Q96IK5 515 aa24.52■■□□□ 1.52
NPAS3-206ENST00000548645 LXNQ9BS40 222 aa24.52■■□□□ 1.52
NPAS3-206ENST00000548645 SAYSD1Q9NPB0 183 aa24.52■■□□□ 1.52
NPAS3-206ENST00000548645 ANKRD33BA6NCL7 494 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 SPDYE5A6NIY4 337 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 POC1B-GALNT4F8VUJ3 575 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 C2CD2LO14523 706 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 NVLO15381 856 aaKnown RBP24.51■■□□□ 1.51
NPAS3-206ENST00000548645 PTP4A2Q12974 167 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms