RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SFI1A8K8P3 1242 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 E9PMD0 336 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 TMEM189-UBE2V1I3L0A0 370 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 PODXLO00592 558 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 NCAM2O15394 837 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 ECI2O75521 394 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 MYL4P12829 197 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 RBM25P49756 843 aaKnown RBP13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 EFNA5P52803 228 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 MTAPQ13126 283 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 FZD5Q13467 585 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 ZNF528Q3MIS6 628 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 FAM78AQ5JUQ0 283 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 TTC38Q5R3I4 469 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 ZNF461Q8TAF7 563 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 C18orf25Q96B23 403 aaPredicted RBP13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 C8orf76Q96K31 380 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 ZBTB45Q96K62 511 aaPredicted RBP13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 ZSWIM3Q96MP5 696 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 ACO2Q99798 780 aaKnown RBP13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 TARS2Q9BW92 718 aaKnown RBP13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 OSBPL6Q9BZF3 934 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 CDT1Q9H211 546 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 ZFP14Q9HCL3 533 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 DDX19AQ9NUU7 478 aaKnown RBP13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 LRWD1Q9UFC0 647 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 TNFSF13BQ9Y275 285 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 F5P12259 2224 aa13.11□□□□□ -0.31
TRAFD1-205ENST00000548277 TCHHQ07283 1943 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 CDC25AP30304 524 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 VIPR2P41587 438 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 GRM5P41594 1212 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 CCR2P41597 374 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 SPAG1Q07617 926 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 ADCY1Q08828 1119 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 RAD51AP2Q09MP3 1159 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 ZRSR1Q15695 479 aaKnown RBP13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 CTXN3Q4LDR2 81 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 ALKAL1Q6UXT8 129 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 PDZD4Q76G19 769 aaPredicted RBP13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 APBB1IPQ7Z5R6 666 aaPredicted RBP13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 KIFAP3Q92845 792 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 CLDN23Q96B33 292 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 ELSPBP1Q96BH3 223 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 ACAP3Q96P50 834 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 NELL2Q99435 816 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 TRMT61BQ9BVS5 477 aaKnown RBP13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 ZSCAN32Q9NX65 697 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 GDE1Q9NZC3 331 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 FBXL5Q9UKA1 691 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 USP18Q9UMW8 372 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 SMG5Q9UPR3 1016 aaKnown RBP13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 MRPS17Q9Y2R5 130 aaKnown RBP13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 PCDHGA2Q9Y5H1 932 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 SDK1Q7Z5N4 2213 aa13.1□□□□□ -0.31
TRAFD1-205ENST00000548277 ARHGEF37A1IGU5 675 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 DCDC2BA2VCK2 349 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 SHISA7A6NL88 538 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 PP2D1A8MPX8 630 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 SPTLC1O15269 473 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 SLC16A4O15374 487 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 HIP1RO75146 1068 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 ABLIM3O94929 683 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 SEC24BO95487 1268 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 ATF2P15336 505 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 GDI1P31150 447 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 MCM4P33991 863 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 NPTX2P47972 431 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 CDR1P51861 262 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 TWF1Q12792 350 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 PRSS36Q5K4E3 855 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 CYP4A22Q5TCH4 519 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 HAUS3Q68CZ6 603 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 SLC8B1Q6J4K2 584 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 SNX29Q8TEQ0 813 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 SECISBP2LQ93073 1101 aaKnown RBP13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 ZNF512Q96ME7 567 aaPredicted RBP13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 MRPL4Q9BYD3 311 aaKnown RBP13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 LMAN1LQ9HAT1 526 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 KMT5AQ9NQR1 393 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 TOPORSQ9NS56 1045 aaPredicted RBP13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 DLL3Q9NYJ7 618 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 TIMM13Q9Y5L4 95 aaPredicted RBP13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 INSL5Q9Y5Q6 135 aa13.09□□□□□ -0.31
TRAFD1-205ENST00000548277 DNAH14Q0VDD8 3507 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 H7C4K7 107 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 ZNF197O14709 1029 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 EIF5BO60841 1220 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 POU2F2P09086 479 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 CPB1P15086 417 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 FCARP24071 287 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 MATR3P43243 847 aaKnown RBP eCLIP13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 MAGEA9P43362 315 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 ATXN1P54253 815 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 IQCEQ6IPM2 695 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 VITQ6UXI7 678 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 RNF19BQ6ZMZ0 732 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 TAS1R3Q7RTX0 852 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 ELMOD1Q8N336 334 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms