RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 BTBD7Q9P203 1132 aa9.31□□□□□ -0.92
TMEM116-205ENST00000547878 TMCO1Q9UM00 188 aa9.31□□□□□ -0.92
TMEM116-205ENST00000547878 FRMPD4Q14CM0 1322 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 SYNGAP1Q96PV0 1343 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 ZMYM2Q9UBW7 1377 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 NPHP3-ACAD11A0A0J9YXS1 232 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 ZSCAN5CA6NGD5 496 aaPredicted RBP9.3□□□□□ -0.92
TMEM116-205ENST00000547878 SLC15A5A6NIM6 579 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 KBTBD13C9JR72 458 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 KCNK3O14649 394 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 PPP1R37O75864 691 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 EYA4O95677 639 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 FAM153BP0C7A2 387 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 NR1D1P20393 614 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 LSP1P33241 339 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 PHEXP78562 749 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 MRPS5P82675 430 aaKnown RBP9.3□□□□□ -0.92
TMEM116-205ENST00000547878 LMNB2Q03252 620 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 ITGB3BPQ13352 177 aaPredicted RBP9.3□□□□□ -0.92
TMEM116-205ENST00000547878 BIRC3Q13489 604 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 GRB14Q14449 540 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 CLUL1Q15846 466 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 PPP2R5EQ16537 467 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 FAM153CQ494X1 144 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 PRAMEF19Q5SWL8 479 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 BTNL9Q6UXG8 535 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 TMEM179Q6ZVK1 233 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 ARFGAP2Q8N6H7 521 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 ARRDC4Q8NCT1 418 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 OLIG1Q8TAK6 271 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 TMEM174Q8WUU8 243 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 GJA10Q969M2 543 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 PPP2R3CQ969Q6 453 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 TIFAQ96CG3 184 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 HES6Q96HZ4 224 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 SYT11Q9BT88 431 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 EPN3Q9H201 632 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 NRDE2Q9H7Z3 1164 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 SLC40A1Q9NP59 571 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 KCND2Q9NZV8 630 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 TBC1D7Q9P0N9 293 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 GCNT4Q9P109 453 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 SEL1LQ9UBV2 794 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 CIDEBQ9UHD4 219 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 FAM153AQ9UHL3 310 aa9.3□□□□□ -0.92
TMEM116-205ENST00000547878 G3BP2Q9UN86 482 aaKnown RBP9.3□□□□□ -0.92
TMEM116-205ENST00000547878 DIS3Q9Y2L1 958 aaKnown RBP9.3□□□□□ -0.92
TMEM116-205ENST00000547878 TCF20Q9UGU0 1960 aaKnown RBP9.3□□□□□ -0.92
TMEM116-205ENST00000547878 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.29□□□□□ -0.92
TMEM116-205ENST00000547878 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.29□□□□□ -0.92
TMEM116-205ENST00000547878 ESYT3A0FGR9 886 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 C19orf81C9J6K1 198 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 FAM86B1E9PN63 330 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 TBCAO75347 108 aaKnown RBP9.29□□□□□ -0.92
TMEM116-205ENST00000547878 SKAP2O75563 359 aaPredicted RBP9.29□□□□□ -0.92
TMEM116-205ENST00000547878 NPTXRO95502 500 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 ASNSP08243 561 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 H2AFZP0C0S5 128 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 FAM86B2P0C5J1 330 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 EEF2P13639 858 aaKnown RBP9.29□□□□□ -0.92
TMEM116-205ENST00000547878 SLC9A1P19634 815 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 STAT3P40763 770 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 ZNF131P52739 623 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 ZYXQ15942 572 aaKnown RBP9.29□□□□□ -0.92
TMEM116-205ENST00000547878 PRR16Q569H4 304 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 SLFN13Q68D06 897 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 MAMSTRQ6ZN01 415 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 H2AFVQ71UI9 128 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 SLC30A5Q8TAD4 765 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 P3H4Q92791 437 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 TMEM165Q9HC07 324 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 TMBIM4Q9HC24 238 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 TUFT1Q9NNX1 390 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 PI4KBQ9UBF8 816 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 HERC5Q9UII4 1024 aaKnown RBP9.29□□□□□ -0.92
TMEM116-205ENST00000547878 ZBTB21Q9ULJ3 1066 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 RABGAP1Q9Y3P9 1069 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 NOC2LQ9Y3T9 749 aaKnown RBP9.29□□□□□ -0.92
TMEM116-205ENST00000547878 PPME1Q9Y570 386 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 NFS1Q9Y697 457 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 PLXNA1Q9UIW2 1896 aa9.29□□□□□ -0.92
TMEM116-205ENST00000547878 NDUFAB1O14561 156 aa9.28□□□□□ -0.92
TMEM116-205ENST00000547878 KIAA0355O15063 1070 aa9.28□□□□□ -0.92
TMEM116-205ENST00000547878 MSH4O15457 936 aa9.28□□□□□ -0.92
TMEM116-205ENST00000547878 VIMP08670 466 aaKnown RBP9.28□□□□□ -0.92
TMEM116-205ENST00000547878 PAEPP09466 180 aa9.28□□□□□ -0.92
TMEM116-205ENST00000547878 CLTBP09497 229 aa9.28□□□□□ -0.92
TMEM116-205ENST00000547878 ACTN1P12814 892 aa9.28□□□□□ -0.92
TMEM116-205ENST00000547878 HADHBP55084 474 aaKnown RBP9.28□□□□□ -0.92
TMEM116-205ENST00000547878 SH3BGRP55822 239 aaPredicted RBP9.28□□□□□ -0.92
TMEM116-205ENST00000547878 MRPS25P82663 173 aaKnown RBP9.28□□□□□ -0.92
TMEM116-205ENST00000547878 ARID5AQ03989 594 aa9.28□□□□□ -0.92
TMEM116-205ENST00000547878 PDCLQ13371 301 aa9.28□□□□□ -0.92
TMEM116-205ENST00000547878 RIPK1Q13546 671 aa9.28□□□□□ -0.92
TMEM116-205ENST00000547878 TCEAL1Q15170 157 aa9.28□□□□□ -0.92
TMEM116-205ENST00000547878 USH1GQ495M9 461 aa9.28□□□□□ -0.92
TMEM116-205ENST00000547878 C1orf53Q5VUE5 145 aa9.28□□□□□ -0.92
TMEM116-205ENST00000547878 CYB5D1Q6P9G0 228 aa9.28□□□□□ -0.92
TMEM116-205ENST00000547878 RUFY4Q6ZNE9 571 aa9.28□□□□□ -0.92
TMEM116-205ENST00000547878 MAATS1Q7Z4T9 603 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms