RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 KCMF1Q9P0J7 381 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 SAE1Q9UBE0 346 aaPredicted RBP5.39□□□□□ -1.55
CBX5-203ENST00000547872 FAM184BQ9ULE4 1060 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 NOC2LQ9Y3T9 749 aaKnown RBP5.39□□□□□ -1.55
CBX5-203ENST00000547872 KIF7Q2M1P5 1343 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 ANKRD36CQ5JPF3 1778 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 SZT2Q5T011 3432 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 SPEF2Q9C093 1822 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.38□□□□□ -1.55
CBX5-203ENST00000547872 UFL1O94874 794 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 STAT5BP51692 787 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 PPP2CBP62714 309 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 PPP2CAP67775 309 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 SP3Q02447 781 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 AIMP1Q12904 312 aaKnown RBP5.38□□□□□ -1.55
CBX5-203ENST00000547872 GRAPQ13588 217 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 FRMD7Q6ZUT3 714 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 ARMC9Q7Z3E5 817 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 ATL2Q8NHH9 583 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 GRAPLQ8TC17 118 aaPredicted RBP5.38□□□□□ -1.55
CBX5-203ENST00000547872 DPF2Q92785 391 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 BDH2Q9BUT1 245 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 UTP14AQ9BVJ6 771 aaKnown RBP5.38□□□□□ -1.55
CBX5-203ENST00000547872 RTFDC1Q9BY42 306 aaPredicted RBP5.38□□□□□ -1.55
CBX5-203ENST00000547872 ARHGAP39Q9C0H5 1083 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 KIAA1683Q9H0B3 1180 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 KCNG1Q9UIX4 513 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 MAGEL2Q9UJ55 1249 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 ZMYND8Q9ULU4 1186 aaPredicted RBP5.38□□□□□ -1.55
CBX5-203ENST00000547872 SYNPO2Q9UMS6 1093 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 SLC4A7Q9Y6M7 1214 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 BRCA2P51587 3418 aa5.38□□□□□ -1.55
CBX5-203ENST00000547872 KDM1AO60341 852 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 PLATP00750 562 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 SYN1P17600 705 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 EIF2S2P20042 333 aaKnown RBP5.37□□□□□ -1.55
CBX5-203ENST00000547872 RPS12P25398 132 aaKnown RBP5.37□□□□□ -1.55
CBX5-203ENST00000547872 PRKAR2BP31323 418 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 SESN3P58005 492 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 FKBP1BP68106 108 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 TMPRSS15P98073 1019 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 STAT4Q14765 748 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 PCOLCEQ15113 449 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 IQSEC1Q6DN90 963 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 LILRA6Q6PI73 481 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 BMP8AQ7Z5Y6 402 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 CELF1Q92879 486 aaKnown RBP5.37□□□□□ -1.55
CBX5-203ENST00000547872 RELTQ969Z4 430 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 EYA3Q99504 573 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 MS4A5Q9H3V2 200 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 MTG2Q9H4K7 406 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 POLLQ9UGP5 575 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 TRMT112Q9UI30 125 aaKnown RBP5.37□□□□□ -1.55
CBX5-203ENST00000547872 MCM8Q9UJA3 840 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 DENND2AQ9ULE3 1009 aa5.37□□□□□ -1.55
CBX5-203ENST00000547872 LCHNA4D1U4 455 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 MANSC4A6NHS7 340 aaPredicted RBP5.36□□□□□ -1.55
CBX5-203ENST00000547872 H2AFYO75367 372 aaKnown RBP5.36□□□□□ -1.55
CBX5-203ENST00000547872 MRE11P49959 708 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 SESN2P58004 480 aaPredicted RBP5.36□□□□□ -1.55
CBX5-203ENST00000547872 TRIM68Q6AZZ1 485 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 KLHDC10Q6PID8 442 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 GLB1LQ6UWU2 654 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 ZNF662Q6ZS27 426 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 USP30Q70CQ3 517 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 LARP4Q71RC2 724 aaKnown RBP eCLIP5.36□□□□□ -1.552e-8■□□□□ 10.6
CBX5-203ENST00000547872 KANSL1Q7Z3B3 1105 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 RASSF3Q86WH2 238 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 CXorf38Q8TB03 319 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 WDR66Q8TBY9 1149 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 DYDC2Q96IM9 177 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 PHACTR3Q96KR7 559 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 HTATIP2Q9BUP3 242 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 OR10A2Q9H208 303 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 VPS33BQ9H267 617 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 SEMA4AQ9H3S1 761 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 POLR3BQ9NW08 1133 aaPredicted RBP5.36□□□□□ -1.55
CBX5-203ENST00000547872 VWA7Q9Y334 891 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 KNSTRNQ9Y448 316 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 NR2E1Q9Y466 385 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 IBTKQ9P2D0 1353 aaPredicted RBP5.36□□□□□ -1.55
CBX5-203ENST00000547872 OTOFQ9HC10 1997 aa5.36□□□□□ -1.55
CBX5-203ENST00000547872 CENPFP49454 3210 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 CLRN2A0PK11 232 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 NPEPPSL1A6NEC2 478 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 ELL2O00472 640 aaPredicted RBP5.35□□□□□ -1.55
CBX5-203ENST00000547872 ARHGAP6O43182 974 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 OPHN1O60890 802 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 BBOX1O75936 387 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 PCDH8O95206 1070 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 CNOT4O95628 575 aaKnown RBP5.35□□□□□ -1.55
CBX5-203ENST00000547872 EPHB4P54760 987 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 RAC3P60763 192 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 PLP2Q04941 152 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 AGBL4Q5VU57 503 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 UNQ6494/PRO21346Q6UXR6 183 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 CXorf67Q86X51 503 aaPredicted RBP5.35□□□□□ -1.55
CBX5-203ENST00000547872 ZNF34Q8IZ26 560 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 CLRN3Q8NCR9 226 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 TBC1D16Q8TBP0 767 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms