RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ZBTB41Q5SVQ8 909 aa14.58□□□□□ -0.08
CPSF6-204ENST00000547486 SLC8B1Q6J4K2 584 aa14.58□□□□□ -0.08
CPSF6-204ENST00000547486 PARM1Q6UWI2 310 aa14.58□□□□□ -0.08
CPSF6-204ENST00000547486 BRAPQ7Z569 592 aa14.58□□□□□ -0.08
CPSF6-204ENST00000547486 GPBP1Q86WP2 473 aa14.58□□□□□ -0.08
CPSF6-204ENST00000547486 ITFG1Q8TB96 612 aa14.58□□□□□ -0.08
CPSF6-204ENST00000547486 ATOH1Q92858 354 aaPredicted RBP14.58□□□□□ -0.08
CPSF6-204ENST00000547486 FGF13Q92913 245 aa14.58□□□□□ -0.08
CPSF6-204ENST00000547486 LARSQ9P2J5 1176 aaKnown RBP14.58□□□□□ -0.08
CPSF6-204ENST00000547486 WNT16Q9UBV4 365 aa14.58□□□□□ -0.08
CPSF6-204ENST00000547486 TUBGCP4Q9UGJ1 667 aa14.58□□□□□ -0.08
CPSF6-204ENST00000547486 CDH7Q9ULB5 785 aa14.58□□□□□ -0.08
CPSF6-204ENST00000547486 POLIQ9UNA4 740 aa14.58□□□□□ -0.08
CPSF6-204ENST00000547486 CLIC4Q9Y696 253 aa14.58□□□□□ -0.08
CPSF6-204ENST00000547486 NUMBLQ9Y6R0 609 aa14.58□□□□□ -0.08
CPSF6-204ENST00000547486 VWA8A3KMH1 1905 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 FAM189A1O60320 539 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 ABLIM3O94929 683 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 CXCL8P10145 99 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 SRFP11831 508 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 PLCG1P19174 1290 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 AOC1P19801 751 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 LONP1P36776 959 aaKnown RBP14.57□□□□□ -0.08
CPSF6-204ENST00000547486 ZNF131P52739 623 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 ROR1Q01973 937 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 SPECC1Q5M775 1068 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 POTEHQ6S545 545 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 USP49Q70CQ1 688 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 MYCT1Q8N699 235 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 ZNF461Q8TAF7 563 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 GPR152Q8TDT2 470 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 RAD54LQ92698 747 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 FGF14Q92915 247 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 KCNN1Q92952 543 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 CALML4Q96GE6 196 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 FIZ1Q96SL8 496 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 ODF2LQ9ULJ1 636 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 CA14Q9ULX7 337 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 TBX20Q9UMR3 447 aa14.57□□□□□ -0.08
CPSF6-204ENST00000547486 MTCL1Q9Y4B5 1905 aaKnown RBP14.56□□□□□ -0.08
CPSF6-204ENST00000547486 USP34Q70CQ2 3546 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 TTC26A0AVF1 554 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 WDR27A2RRH5 827 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 VPS37CA5D8V6 355 aaPredicted RBP14.56□□□□□ -0.08
CPSF6-204ENST00000547486 SYN3O14994 580 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 XYLBO75191 536 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 SEC24AO95486 1093 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 POU2F2P09086 479 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 CLTAP09496 248 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 MATR3P43243 847 aaKnown RBP eCLIP14.56□□□□□ -0.084e-7■■■■■ 28.5
CPSF6-204ENST00000547486 ARPP19P56211 112 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 PTPAQ15257 358 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 ZBTB6Q15916 424 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 FAM173BQ6P4H8 233 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 EPSTI1Q96J88 318 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 SUSD3Q96L08 255 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 PLEKHA5Q9HAU0 1116 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 FBXL5Q9UKA1 691 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 NUB1Q9Y5A7 615 aa14.56□□□□□ -0.08
CPSF6-204ENST00000547486 ZFP37Q9Y6Q3 630 aaPredicted RBP14.56□□□□□ -0.08
CPSF6-204ENST00000547486 LACTBL1A8MY62 500 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 H0YCG3 227 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 TRAK2O60296 914 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 FAM13AO94988 1023 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 BMP15O95972 392 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 MARCKSP29966 332 aaPredicted RBP14.55□□□□□ -0.08
CPSF6-204ENST00000547486 NMT1P30419 496 aaKnown RBP14.55□□□□□ -0.08
CPSF6-204ENST00000547486 DDIT3P35638 169 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 LIG4P49917 911 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 GPC5P78333 572 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 ENOX2Q16206 610 aaKnown RBP14.55□□□□□ -0.08
CPSF6-204ENST00000547486 SLC5A9Q2M3M2 681 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 SLC39A4Q6P5W5 647 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 DDX12PQ92771 950 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 BICD1Q96G01 975 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 CCSER1Q9C0I3 900 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 IRF2BPLQ9H1B7 796 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 PARVGQ9HBI0 331 aa14.55□□□□□ -0.08
CPSF6-204ENST00000547486 TRIP11Q15643 1979 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 DOCK6Q96HP0 2047 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 A0A0B4J269 797 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 ARHGEF37A1IGU5 675 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 ANKRD63C9JTQ0 380 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 H7C4K7 107 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 K7ENM7 598 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 STK25O00506 426 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 PIGRP01833 764 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 KRT18P05783 430 aaKnown RBP14.54□□□□□ -0.08
CPSF6-204ENST00000547486 RHOP08100 348 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 ATF2P15336 505 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 SYT1P21579 422 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 LRPAP1P30533 357 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 MCM4P33991 863 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 GUCY2FP51841 1108 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 RESTQ13127 1097 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 CTXN3Q4LDR2 81 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 PABPC1LQ4VXU2 614 aaKnown RBP14.54□□□□□ -0.08
CPSF6-204ENST00000547486 ZC2HC1CQ53FD0 456 aaPredicted RBP14.54□□□□□ -0.08
CPSF6-204ENST00000547486 RTL10Q7L3V2 364 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 NPAS3Q8IXF0 933 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms