RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	HPS3	Q969F9	1004 aa		5.81	□□□□□ -1.48
LGR5-204	ENST00000547310	TMX3	Q96JJ7	454 aa		5.81	□□□□□ -1.48
LGR5-204	ENST00000547310	CLPTM1L	Q96KA5	538 aa		5.81	□□□□□ -1.48
LGR5-204	ENST00000547310	PLEKHG4B	Q96PX9	1271 aa		5.81	□□□□□ -1.48
LGR5-204	ENST00000547310	SLC46A2	Q9BY10	475 aa		5.81	□□□□□ -1.48
LGR5-204	ENST00000547310	C11orf54	Q9H0W9	315 aa	Predicted RBP	5.81	□□□□□ -1.48
LGR5-204	ENST00000547310	SLC12A5	Q9H2X9	1139 aa		5.81	□□□□□ -1.48
LGR5-204	ENST00000547310	ZIM2	Q9NZV7	527 aa		5.81	□□□□□ -1.48
LGR5-204	ENST00000547310	POGK	Q9P215	609 aa		5.81	□□□□□ -1.48
LGR5-204	ENST00000547310	PPFIA4	O75335	1185 aa		5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	ARIH2	O95376	493 aa		5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	FTH1P19	P0C7X4	201 aa		5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	U2AF1L5	P0DN76	240 aa	Predicted RBP	5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	APOBEC3A	P31941	199 aa	Predicted RBP	5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	U2AF1	Q01081	240 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	PABPC1L	Q4VXU2	614 aa	Known RBP	5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	GDF7	Q7Z4P5	450 aa		5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	RHOT2	Q8IXI1	618 aa		5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	RNF169	Q8NCN4	708 aa		5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	KAT5	Q92993	513 aa		5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	LENG9	Q96B70	501 aa		5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	MYOC	Q99972	504 aa		5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	GTPBP4	Q9BZE4	634 aa	Known RBP	5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	MAN1C1	Q9NR34	630 aa		5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	SIDT1	Q9NXL6	827 aa	Known RBP	5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	EIF2B4	Q9UI10	523 aa	Known RBP	5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	SORCS3	Q9UPU3	1222 aa		5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	EID1	Q9Y6B2	187 aa		5.8	□□□□□ -1.48
LGR5-204	ENST00000547310	MTHFD1	P11586	935 aa	Known RBP	5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	GCSH	P23434	173 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	CHN2	P52757	468 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	KRTAP10-7	P60409	375 aa	Predicted RBP	5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	CREM	Q03060	361 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	TUBA3C	Q13748	450 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	PGS1	Q32NB8	556 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	NXN	Q6DKJ4	435 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	CXorf57	Q6NSI4	855 aa	Known RBP	5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	TUBA3E	Q6PEY2	450 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	PCSK4	Q6UW60	755 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	RHOU	Q7L0Q8	258 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	C3orf20	Q8ND61	904 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	SLC25A43	Q8WUT9	341 aa	Predicted RBP	5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	NEU4	Q8WWR8	484 aa	Predicted RBP	5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	MVB12A	Q96EY5	273 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	PUS7	Q96PZ0	661 aa	Known RBP	5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	AGAP2	Q99490	1192 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	NEU1	Q99519	415 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	METTL14	Q9HCE5	456 aa	Known RBP	5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	FBXO34	Q9NWN3	711 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	DKK2	Q9UBU2	259 aa		5.79	□□□□□ -1.48
LGR5-204	ENST00000547310	MARCH11	A6NNE9	402 aa		5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	SLC43A1	O75387	559 aa		5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	SCAF4	O95104	1147 aa	Known RBP	5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	CT47B1	P0C2W7	299 aa	Predicted RBP	5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	HK3	P52790	923 aa		5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	ZNF280A	P59817	542 aa	Predicted RBP	5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	RAP2B	P61225	183 aa		5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	FNDC7	Q5VTL7	733 aa		5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	GADL1	Q6ZQY3	521 aa		5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	CATIP	Q7Z7H3	387 aa		5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	GLCCI1	Q86VQ1	547 aa		5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	RAVER1	Q8IY67	606 aa	Known RBP	5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	CPT1C	Q8TCG5	803 aa		5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	JDP2	Q8WYK2	163 aa		5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	C1GALT1C1	Q96EU7	318 aa		5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	FAM167A	Q96KS9	214 aa		5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	FZD1	Q9UP38	647 aa		5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	RUVBL1	Q9Y265	456 aa	Known RBP	5.78	□□□□□ -1.48
LGR5-204	ENST00000547310	NT5C1B-RDH14	C9J2C7	533 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	RNASET2	O00584	256 aa	Known RBP	5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	GRM6	O15303	877 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	PPM1G	O15355	546 aa	Predicted RBP	5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	OFD1	O75665	1012 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	HAUS5	O94927	633 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	SPATA31D3	P0C874	917 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	ITGB6	P18564	788 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	MAL	P21145	153 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	LPO	P22079	712 aa	Predicted RBP	5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	NR4A1	P22736	598 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	PTGS2	P35354	604 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	BMPR1A	P36894	532 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	PTTG1IP	P53801	180 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	RNASE9	P60153	205 aa	Known RBP	5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	NOG	Q13253	232 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	SNAPC2	Q13487	334 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	KHDC1	Q4VXA5	237 aa	Known RBP	5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	FAM102B	Q5T8I3	360 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	ARMC6	Q6NXE6	501 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	B3GNT9	Q6UX72	402 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	SPATA31D4	Q6ZUB0	917 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	MED25	Q71SY5	747 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	UBE3B	Q7Z3V4	1068 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	ZNF276	Q8N554	614 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	FITM2	Q8N6M3	262 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	NUP133	Q8WUM0	1156 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	MYEOV	Q96EZ4	313 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	REXO4	Q9GZR2	422 aa	Known RBP	5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	NMRK2	Q9NPI5	230 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	KMT5A	Q9NQR1	393 aa		5.77	□□□□□ -1.49
LGR5-204	ENST00000547310	KLHL11	Q9NVR0	708 aa		5.77	□□□□□ -1.49

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