RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 BAP1Q92560 729 aa18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 ZNF830Q96NB3 372 aaPredicted RBP18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 DNAJC7Q99615 494 aa18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 IFIH1Q9BYX4 1025 aaKnown RBP18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 NLRC4Q9NPP4 1024 aa18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 DERAQ9Y315 318 aa18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 RBAK-RBAKDNI3L0D1 243 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 MGEA5O60502 916 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 ZC3H11AO75152 810 aaKnown RBP eCLIP18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 PARNO95453 639 aaKnown RBP18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 VNN1O95497 513 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 CSF2RAP15509 400 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 AKAP5P24588 427 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 LRMPQ12912 555 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 TSR1Q2NL82 804 aaKnown RBP18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 IQCEQ6IPM2 695 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 PDXDC1Q6P996 788 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 FAM43BQ6ZT52 329 aaPredicted RBP18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 RRAGAQ7L523 313 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 FAM161BQ96MY7 647 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 NT5C1BQ96P26 610 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 TSPAN18Q96SJ8 248 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 ADAM2Q99965 735 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 NUCKS1Q9H1E3 243 aaKnown RBP18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 RNF39Q9H2S5 420 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 CNTN3Q9P232 1028 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 PARP2Q9UGN5 583 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 FHOD1Q9Y613 1164 aa18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.21■□□□□ 0.51
ARFGAP1-220ENST00000547204 NBNO60934 754 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 ZNF623O75123 536 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 SKIP12755 728 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 ITGA4P13612 1032 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 CYP2C18P33260 490 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 CCZ1BP86790 482 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 CCZ1P86791 482 aaPredicted RBP18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 NCOA4Q13772 614 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 GJB7Q6PEY0 223 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 ALKAL1Q6UXT8 129 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 MRPL10Q7Z7H8 261 aaKnown RBP18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 KIF12Q96FN5 646 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.2■□□□□ 0.53e-9■■□□□ 13.6
ARFGAP1-220ENST00000547204 NAA15Q9BXJ9 866 aaKnown RBP18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 FTHL17Q9BXU8 183 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 DNAJC12Q9UKB3 198 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 MYO6Q9UM54 1294 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 STXBP5LQ9Y2K9 1186 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 UMODL1Q5DID0 1318 aa18.2■□□□□ 0.5
ARFGAP1-220ENST00000547204 A0A0U1RQF3 1178 aa18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 LRRC53A6NM62 1247 aa18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 LRRN2O75325 713 aa18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 FECHP22830 423 aa18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 TRPC3Q13507 836 aa18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 XKR4Q5GH76 650 aa18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 WDR44Q5JSH3 913 aa18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 PHLDB3Q6NSJ2 640 aa18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 ARHGEF19Q8IW93 802 aa18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 SEPT8Q92599 483 aa18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 SPAG5Q96R06 1193 aa18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 BAG1Q99933 345 aaPredicted RBP18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 IMPG2Q9BZV3 1241 aa18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 RGS18Q9NS28 235 aa18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 C1orf112Q9NSG2 853 aa18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 ZNHIT6Q9NWK9 470 aaKnown RBP18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 AJAP1Q9UKB5 411 aaPredicted RBP18.19■□□□□ 0.5
ARFGAP1-220ENST00000547204 PDCD11Q14690 1871 aaKnown RBP18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 CDH23Q9H251 3354 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 KCNE1P15382 129 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 HNRNPH3P31942 346 aaKnown RBP18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 JAM2P57087 298 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 RAPGEF1Q13905 1077 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 GPNMBQ14956 572 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 PLEKHG4Q58EX7 1191 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 PSRC1Q6PGN9 363 aaPredicted RBP18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 C16orf59Q7L2K0 433 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 TMEM139Q8IV31 216 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 C1orf127Q8N9H9 656 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 SYN2Q92777 582 aaPredicted RBP18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 APBB2Q92870 758 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 PGBD4Q96DM1 585 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 FAM81BQ96LP2 452 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 GUCD1Q96NT3 240 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 PI4K2AQ9BTU6 479 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 WNT8AQ9H1J5 351 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 UBE2TQ9NPD8 197 aaPredicted RBP18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 KLK14Q9P0G3 267 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 ITGA11Q9UKX5 1188 aa18.18■□□□□ 0.5
ARFGAP1-220ENST00000547204 XPOTO43592 962 aaKnown RBP18.17■□□□□ 0.5
ARFGAP1-220ENST00000547204 ACRP10323 421 aa18.17■□□□□ 0.5
ARFGAP1-220ENST00000547204 SKILP12757 684 aa18.17■□□□□ 0.5
ARFGAP1-220ENST00000547204 MEA1Q16626 185 aa18.17■□□□□ 0.5
ARFGAP1-220ENST00000547204 TMEM240Q5SV17 173 aa18.17■□□□□ 0.5
ARFGAP1-220ENST00000547204 SFMBT2Q5VUG0 894 aa18.17■□□□□ 0.5
ARFGAP1-220ENST00000547204 PPM1KQ8N3J5 372 aa18.17■□□□□ 0.5
ARFGAP1-220ENST00000547204 BEST2Q8NFU1 509 aa18.17■□□□□ 0.5
ARFGAP1-220ENST00000547204 HELQQ8TDG4 1101 aa18.17■□□□□ 0.5
ARFGAP1-220ENST00000547204 SCLYQ96I15 445 aa18.17■□□□□ 0.5
ARFGAP1-220ENST00000547204 ZMAT2Q96NC0 199 aaKnown RBP18.17■□□□□ 0.5
ARFGAP1-220ENST00000547204 STK33Q9BYT3 514 aa18.17■□□□□ 0.5
ARFGAP1-220ENST00000547204 CXCL16Q9H2A7 254 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms