RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 TMC6Q7Z403 805 aa17.08■□□□□ 0.32
TRAFD1-203ENST00000547063 BADQ92934 168 aa17.08■□□□□ 0.32
TRAFD1-203ENST00000547063 LPPQ93052 612 aa17.08■□□□□ 0.32
TRAFD1-203ENST00000547063 EDEM3Q9BZQ6 932 aa17.08■□□□□ 0.32
TRAFD1-203ENST00000547063 INTS2Q9H0H0 1204 aaKnown RBP17.08■□□□□ 0.32
TRAFD1-203ENST00000547063 DPP3Q9NY33 737 aa17.08■□□□□ 0.32
TRAFD1-203ENST00000547063 BRCA2P51587 3418 aa17.08■□□□□ 0.32
TRAFD1-203ENST00000547063 LTBP2Q14767 1821 aa17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 HLA-DRAP01903 254 aa17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 FGBP02675 491 aa17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 IBSPP21815 317 aaPredicted RBP17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 ATICP31939 592 aa17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 KCNJ6P48051 423 aa17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 KCNMA1Q12791 1236 aa17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 NCOA4Q13772 614 aa17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 SGSM1Q2NKQ1 1148 aa17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 ZNF397Q8NF99 534 aaPredicted RBP17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 TAS1R2Q8TE23 839 aa17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 PDLIM2Q96JY6 352 aa17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 ZMAT2Q96NC0 199 aaKnown RBP17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 NT5C1BQ96P26 610 aa17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 PPP1R10Q96QC0 940 aaKnown RBP17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 LSM14BQ9BX40 385 aaKnown RBP17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 MRPL9Q9BYD2 267 aaKnown RBP17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 MTIF3Q9H2K0 278 aaKnown RBP17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 FBXL5Q9UKA1 691 aa17.07■□□□□ 0.32
TRAFD1-203ENST00000547063 A0A1W2PQJ5 194 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 MEIS3P2A8K0S8 358 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 PTGESO14684 152 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 OFD1O75665 1012 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 KRT19P08727 400 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 SLC9A1P19634 815 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 PAX3P23760 479 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 PNPLA4P41247 253 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 MYO1EQ12965 1108 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 TCTN1Q2MV58 587 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 NOMO2Q5JPE7 1267 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 GLRA4Q5JXX5 417 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 SMYD5Q6GMV2 418 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 FMNL3Q8IVF7 1028 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 C1orf127Q8N9H9 656 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 LMO3Q8TAP4 145 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 VWCEQ96DN2 955 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 FAXDC2Q96IV6 333 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 ZFP42Q96MM3 310 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 UROC1Q96N76 676 aa17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 FAM207AQ9NSI2 230 aaPredicted RBP17.06■□□□□ 0.32
TRAFD1-203ENST00000547063 VNN1O95497 513 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 STAU1O95793 577 aaKnown RBP17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 ITGB3P05106 788 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 LRPAP1P30533 357 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 RPL9P32969 192 aaKnown RBP17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 SCNN1GP51170 649 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 GSDMDP57764 484 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 KLHDC7AQ5VTJ3 777 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 ENOSF1Q7L5Y1 443 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 CACNA2D4Q7Z3S7 1137 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 CRIPAKQ8N1N5 446 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 LRRC52Q8N7C0 313 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 GSTCDQ8NEC7 633 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 HELQQ8TDG4 1101 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 DDX27Q96GQ7 796 aaKnown RBP17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 ZNF560Q96MR9 790 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 NUCKS1Q9H1E3 243 aaKnown RBP17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 CEP72Q9P209 647 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 APEX2Q9UBZ4 518 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 INPP5FQ9Y2H2 1132 aa17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 TDRD15B5MCY1 1934 aaKnown RBP17.05■□□□□ 0.32
TRAFD1-203ENST00000547063 CLSTN1O94985 981 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 ASS1P00966 412 aaKnown RBP17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 ACRP10323 421 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 P4HA1P13674 534 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 UCHL3P15374 230 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 TBXAS1P24557 533 aaPredicted RBP17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 POLR2BP30876 1174 aaKnown RBP17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 WDR5P61964 334 aaKnown RBP17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 RNASELQ05823 741 aaKnown RBP17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 TUSC3Q13454 348 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 ZNF699Q32M78 642 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 CLLU1OSQ5K130 101 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 CNGA4Q8IV77 575 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 SPC24Q8NBT2 197 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 SEMA4DQ92854 862 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 TOP1MTQ969P6 601 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 C18orf25Q96B23 403 aaPredicted RBP17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 FAM193BQ96PV7 902 aaPredicted RBP17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 PPP1R9BQ96SB3 815 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 VRTNQ9H8Y1 702 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 SIX4Q9UIU6 781 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 ZMYND8Q9ULU4 1186 aaPredicted RBP17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 MYO6Q9UM54 1294 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 CAPN11Q9UMQ6 739 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 AGAP1Q9UPQ3 857 aa17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 LUC7L2Q9Y383 392 aaKnown RBP17.04■□□□□ 0.32
TRAFD1-203ENST00000547063 ANO9A1A5B4 782 aa17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 CARNS1A5YM72 827 aa17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 CST3P01034 146 aaPredicted RBP17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 FGFR1P11362 822 aa17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 SYN1P17600 705 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms