RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 HERC2P3Q9BVR0 1158 aa15.69■□□□□ 0.1
DDX54-203ENST00000546869 GOLGA2P5Q9HBQ8 144 aa15.69■□□□□ 0.1
DDX54-203ENST00000546869 MAPK8IP1Q9UQF2 711 aa15.69■□□□□ 0.1
DDX54-203ENST00000546869 SF3B1O75533 1304 aaKnown RBP eCLIP15.68■□□□□ 0.1
DDX54-203ENST00000546869 TDRD15B5MCY1 1934 aaKnown RBP15.68■□□□□ 0.1
DDX54-203ENST00000546869 COL4A4P53420 1690 aaPredicted RBP15.68■□□□□ 0.1
DDX54-203ENST00000546869 ANO9A1A5B4 782 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 F8W810 466 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 PIRO00625 290 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 C1RP00736 705 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 NR3C1P04150 777 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 NFICP08651 508 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 CYP2J2P51589 502 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 CLDN10P78369 228 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 DSG1Q02413 1049 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 STIM1Q13586 685 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 PSMD6Q15008 389 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 USP41Q3LFD5 358 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 KIAA0319Q5VV43 1072 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 SMYD4Q8IYR2 804 aaPredicted RBP15.68■□□□□ 0.1
DDX54-203ENST00000546869 GPT2Q8TD30 523 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 GPR62Q9BZJ7 368 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 NUP62CLQ9H1M0 184 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 ENTPD7Q9NQZ7 604 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 TUBGCP4Q9UGJ1 667 aa15.68■□□□□ 0.1
DDX54-203ENST00000546869 CDH23Q9H251 3354 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 C2orf71A6NGG8 1288 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 PPP1R3GB7ZBB8 358 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 CXCL14O95715 111 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 CCNE1P24864 410 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 MCM4P33991 863 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 AARSP49588 968 aaKnown RBP eCLIP15.67■□□□□ 0.1
DDX54-203ENST00000546869 WNT7BP56706 349 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 LRRC63Q05C16 580 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 SPAG1Q07617 926 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 CYP24A1Q07973 514 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 ADAM9Q13443 819 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 TCEAL5Q5H9L2 206 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 PDXDC1Q6P996 788 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 TAS1R1Q7RTX1 841 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 WDR49Q8IV35 697 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 ZC3H3Q8IXZ2 948 aaKnown RBP15.67■□□□□ 0.1
DDX54-203ENST00000546869 EFCAB13Q8IY85 973 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 C3orf58Q8NDZ4 430 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 RXFP1Q9HBX9 757 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 PDE11AQ9HCR9 933 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 MRPL17Q9NRX2 175 aaKnown RBP15.67■□□□□ 0.1
DDX54-203ENST00000546869 INTS13Q9NVM9 706 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 DPP3Q9NY33 737 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 CACNG4Q9UBN1 327 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 FRMD4BQ9Y2L6 1034 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 MYO9BQ13459 2157 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 CITO14578 2027 aa15.67■□□□□ 0.1
DDX54-203ENST00000546869 PSMA7O14818 248 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 SLC34A2O95436 690 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 FGFR3P22607 806 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 NR2F2P24468 414 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 GLUD2P49448 558 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 AP3M2P53677 418 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 PTPN14Q15678 1187 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 DUOXA2Q1HG44 320 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 C9orf57Q5W0N0 161 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.66■□□□□ 0.1
DDX54-203ENST00000546869 RBM43Q6ZSC3 357 aaKnown RBP15.66■□□□□ 0.1
DDX54-203ENST00000546869 RDH13Q8NBN7 331 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 CXorf38Q8TB03 319 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 TMC2Q8TDI7 906 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 PARD3BQ8TEW8 1205 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 RABGGTAQ92696 567 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 SUSD3Q96L08 255 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 TSG101Q99816 390 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 TTPALQ9BTX7 342 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 MKNK1Q9BUB5 465 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.66■□□□□ 0.1
DDX54-203ENST00000546869 FNIP2Q9P278 1114 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 ITGA11Q9UKX5 1188 aa15.66■□□□□ 0.1
DDX54-203ENST00000546869 PLXNA4Q9HCM2 1894 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.65■□□□□ 0.1
DDX54-203ENST00000546869 HIDE1A8MVS5 230 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 M0QZQ0 153 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 IKBKBO14920 756 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 SYN3O14994 580 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 URODP06132 367 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 CD44P16070 742 aaKnown RBP15.65■□□□□ 0.1
DDX54-203ENST00000546869 IGFBP6P24592 240 aaPredicted RBP15.65■□□□□ 0.1
DDX54-203ENST00000546869 PSMC2P35998 433 aaKnown RBP15.65■□□□□ 0.1
DDX54-203ENST00000546869 FKBP3Q00688 224 aaKnown RBP15.65■□□□□ 0.1
DDX54-203ENST00000546869 CREMQ03060 361 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 HYAL1Q12794 435 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 ADAM15Q13444 863 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 KCNC3Q14003 757 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 DUSP6Q16828 381 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 CTC1Q2NKJ3 1217 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 PLPP4Q5VZY2 271 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 ANKRD40Q6AI12 368 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 ISM2Q6H9L7 571 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 KIAA1841Q6NSI8 718 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 TMEM184AQ6ZMB5 413 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 USP37Q86T82 979 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 EFHBQ8N7U6 833 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms