RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 NUBP1P53384 320 aa21.69■■□□□ 1.06
CHD4-213ENST00000545584 GRASPQ7Z6J2 395 aaPredicted RBP21.69■■□□□ 1.06
CHD4-213ENST00000545584 SLC7A14Q8TBB6 771 aa21.69■■□□□ 1.06
CHD4-213ENST00000545584 C18orf25Q96B23 403 aaPredicted RBP21.69■■□□□ 1.06
CHD4-213ENST00000545584 INTS4Q96HW7 963 aaKnown RBP21.69■■□□□ 1.06
CHD4-213ENST00000545584 BACH2Q9BYV9 841 aa21.69■■□□□ 1.06
CHD4-213ENST00000545584 IRF2BPLQ9H1B7 796 aa21.69■■□□□ 1.06
CHD4-213ENST00000545584 TBX20Q9UMR3 447 aa21.69■■□□□ 1.06
CHD4-213ENST00000545584 CLIC4Q9Y696 253 aa21.69■■□□□ 1.06
CHD4-213ENST00000545584 ZFP37Q9Y6Q3 630 aaPredicted RBP21.69■■□□□ 1.06
CHD4-213ENST00000545584 H7C4K7 107 aa21.68■■□□□ 1.06
CHD4-213ENST00000545584 CCL16O15467 120 aa21.68■■□□□ 1.06
CHD4-213ENST00000545584 CXCL8P10145 99 aa21.68■■□□□ 1.06
CHD4-213ENST00000545584 LAMP2P13473 410 aa21.68■■□□□ 1.06
CHD4-213ENST00000545584 MARCKSP29966 332 aaPredicted RBP21.68■■□□□ 1.06
CHD4-213ENST00000545584 MCM4P33991 863 aa21.68■■□□□ 1.06
CHD4-213ENST00000545584 DDIT3P35638 169 aa21.68■■□□□ 1.06
CHD4-213ENST00000545584 TXLNAP40222 546 aa21.68■■□□□ 1.06
CHD4-213ENST00000545584 VARS2Q5ST30 1063 aaKnown RBP21.68■■□□□ 1.06
CHD4-213ENST00000545584 ALYREFQ86V81 257 aaKnown RBP21.68■■□□□ 1.06
CHD4-213ENST00000545584 KRI1Q8N9T8 703 aaKnown RBP21.68■■□□□ 1.06
CHD4-213ENST00000545584 LRRC15Q8TF66 581 aa21.68■■□□□ 1.06
CHD4-213ENST00000545584 KMT2EQ8IZD2 1858 aa21.68■■□□□ 1.06
CHD4-213ENST00000545584 XPOTO43592 962 aaKnown RBP21.67■■□□□ 1.06
CHD4-213ENST00000545584 POU2F2P09086 479 aa21.67■■□□□ 1.06
CHD4-213ENST00000545584 ELF1P32519 619 aa21.67■■□□□ 1.06
CHD4-213ENST00000545584 PPP2R3AQ06190 1150 aa21.67■■□□□ 1.06
CHD4-213ENST00000545584 RESTQ13127 1097 aa21.67■■□□□ 1.06
CHD4-213ENST00000545584 PTPAQ15257 358 aa21.67■■□□□ 1.06
CHD4-213ENST00000545584 RSPO2Q6UXX9 243 aaPredicted RBP21.67■■□□□ 1.06
CHD4-213ENST00000545584 RSAD2Q8WXG1 361 aa21.67■■□□□ 1.06
CHD4-213ENST00000545584 EPSTI1Q96J88 318 aa21.67■■□□□ 1.06
CHD4-213ENST00000545584 STK17AQ9UEE5 414 aa21.67■■□□□ 1.06
CHD4-213ENST00000545584 SRPRBQ9Y5M8 271 aaKnown RBP21.67■■□□□ 1.06
CHD4-213ENST00000545584 MEFVO15553 781 aaPredicted RBP21.66■■□□□ 1.06
CHD4-213ENST00000545584 PIGRP01833 764 aa21.66■■□□□ 1.06
CHD4-213ENST00000545584 CLCN5P51795 746 aa21.66■■□□□ 1.06
CHD4-213ENST00000545584 SPECC1Q5M775 1068 aa21.66■■□□□ 1.06
CHD4-213ENST00000545584 ASTLQ6HA08 431 aaPredicted RBP21.66■■□□□ 1.06
CHD4-213ENST00000545584 SLC8B1Q6J4K2 584 aa21.66■■□□□ 1.06
CHD4-213ENST00000545584 SLC44A3Q8N4M1 653 aa21.66■■□□□ 1.06
CHD4-213ENST00000545584 APPL2Q8NEU8 664 aa21.66■■□□□ 1.06
CHD4-213ENST00000545584 FLCNQ8NFG4 579 aa21.66■■□□□ 1.06
CHD4-213ENST00000545584 ZNF461Q8TAF7 563 aa21.66■■□□□ 1.06
CHD4-213ENST00000545584 KIF12Q96FN5 646 aa21.66■■□□□ 1.06
CHD4-213ENST00000545584 SUSD3Q96L08 255 aa21.66■■□□□ 1.06
CHD4-213ENST00000545584 HAPLN2Q9GZV7 340 aa21.66■■□□□ 1.06
CHD4-213ENST00000545584 RPF1Q9H9Y2 349 aaKnown RBP21.66■■□□□ 1.06
CHD4-213ENST00000545584 UBQLN1Q9UMX0 589 aaKnown RBP21.66■■□□□ 1.06
CHD4-213ENST00000545584 DOCK8Q8NF50 2099 aa21.65■■□□□ 1.06
CHD4-213ENST00000545584 TTC26A0AVF1 554 aa21.65■■□□□ 1.06
CHD4-213ENST00000545584 K7ELQ4 463 aaPredicted RBP21.65■■□□□ 1.06
CHD4-213ENST00000545584 OGTO15294 1046 aa21.65■■□□□ 1.06
CHD4-213ENST00000545584 ARPP19P56211 112 aa21.65■■□□□ 1.06
CHD4-213ENST00000545584 ROR1Q01973 937 aa21.65■■□□□ 1.06
CHD4-213ENST00000545584 CEBPZQ03701 1054 aaKnown RBP21.65■■□□□ 1.06
CHD4-213ENST00000545584 TCF15Q12870 199 aa21.65■■□□□ 1.06
CHD4-213ENST00000545584 CTXN3Q4LDR2 81 aa21.65■■□□□ 1.06
CHD4-213ENST00000545584 RRAGBQ5VZM2 374 aa21.65■■□□□ 1.06
CHD4-213ENST00000545584 TSPAN18Q96SJ8 248 aa21.65■■□□□ 1.06
CHD4-213ENST00000545584 MSTO1Q9BUK6 570 aa21.65■■□□□ 1.06
CHD4-213ENST00000545584 FOXD4L1Q9NU39 408 aa21.65■■□□□ 1.06
CHD4-213ENST00000545584 TUBGCP4Q9UGJ1 667 aa21.65■■□□□ 1.06
CHD4-213ENST00000545584 FBXO2Q9UK22 296 aaPredicted RBP21.65■■□□□ 1.06
CHD4-213ENST00000545584 CDH7Q9ULB5 785 aa21.65■■□□□ 1.06
CHD4-213ENST00000545584 PRRG1O14668 218 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 NARSO43776 548 aaKnown RBP21.64■■□□□ 1.05
CHD4-213ENST00000545584 CFHP08603 1231 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 SRFP11831 508 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 CYP3A5P20815 502 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 TNFSF9P41273 254 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 MRE11P49959 708 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 NTHL1P78549 312 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 GTF2BQ00403 316 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 SPAG1Q07617 926 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 ZNF280DQ6N043 979 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 FAM173BQ6P4H8 233 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 USP49Q70CQ1 688 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 SIX5Q8N196 739 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 TMEM105Q8N8V8 129 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 ZSCAN16Q9H4T2 348 aaPredicted RBP21.64■■□□□ 1.05
CHD4-213ENST00000545584 WNT16Q9UBV4 365 aa21.64■■□□□ 1.05
CHD4-213ENST00000545584 PIEZO1Q92508 2521 aa21.63■■□□□ 1.05
CHD4-213ENST00000545584 PDCD11Q14690 1871 aaKnown RBP21.63■■□□□ 1.05
CHD4-213ENST00000545584 A0A0B4J269 797 aa21.63■■□□□ 1.05
CHD4-213ENST00000545584 LACTBL1A8MY62 500 aa21.63■■□□□ 1.05
CHD4-213ENST00000545584 ANHXE9PGG2 379 aa21.63■■□□□ 1.05
CHD4-213ENST00000545584 GALR2O43603 387 aaPredicted RBP21.63■■□□□ 1.05
CHD4-213ENST00000545584 LRG1P02750 347 aa21.63■■□□□ 1.05
CHD4-213ENST00000545584 RFX1P22670 979 aa21.63■■□□□ 1.05
CHD4-213ENST00000545584 NMT1P30419 496 aaKnown RBP21.63■■□□□ 1.05
CHD4-213ENST00000545584 LRPAP1P30533 357 aa21.63■■□□□ 1.05
CHD4-213ENST00000545584 HTR4Q13639 388 aa21.63■■□□□ 1.05
CHD4-213ENST00000545584 MRPL58Q14197 206 aaKnown RBP21.63■■□□□ 1.05
CHD4-213ENST00000545584 PABPC1LQ4VXU2 614 aaKnown RBP21.63■■□□□ 1.05
CHD4-213ENST00000545584 SV2BQ7L1I2 683 aa21.63■■□□□ 1.05
CHD4-213ENST00000545584 DYMQ7RTS9 669 aa21.63■■□□□ 1.05
CHD4-213ENST00000545584 MAP4K3Q8IVH8 894 aa21.63■■□□□ 1.05
CHD4-213ENST00000545584 CD302Q8IX05 232 aa21.63■■□□□ 1.05
CHD4-213ENST00000545584 DDX12PQ92771 950 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms