RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 MSANTD3Q96H12 275 aa16.25■□□□□ 0.19
RTN3-214ENST00000545432 GPRC5CQ9NQ84 441 aa16.25■□□□□ 0.19
RTN3-214ENST00000545432 MAFFQ9ULX9 164 aa16.25■□□□□ 0.19
RTN3-214ENST00000545432 PCDHA12Q9UN75 941 aa16.25■□□□□ 0.19
RTN3-214ENST00000545432 CPLX1O14810 134 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 TRAPPC3O43617 180 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 EDN1P05305 212 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 SPATA31C1P0DKV0 1188 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 CLCNKBP51801 687 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 SIM2Q14190 667 aaPredicted RBP16.24■□□□□ 0.19
RTN3-214ENST00000545432 GRM2Q14416 872 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 C1orf228Q6PIY5 440 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 CPLX2Q6PUV4 134 aaKnown RBP16.24■□□□□ 0.19
RTN3-214ENST00000545432 PIK3AP1Q6ZUJ8 805 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 LONP2Q86WA8 852 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 NOSTRINQ8IVI9 506 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 C3orf58Q8NDZ4 430 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 MCPH1Q8NEM0 835 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 PIGOQ8TEQ8 1089 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 TNFRSF25Q93038 417 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 ZSWIM3Q96MP5 696 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 C2orf40Q9H1Z8 148 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 ANGPTL2Q9UKU9 493 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 PIAS3Q9Y6X2 628 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 ATRXP46100 2492 aa16.24■□□□□ 0.19
RTN3-214ENST00000545432 LRRIQ4A6NIV6 560 aa16.23■□□□□ 0.19
RTN3-214ENST00000545432 EPB41L2O43491 1005 aaKnown RBP16.23■□□□□ 0.19
RTN3-214ENST00000545432 MARCH6O60337 910 aa16.23■□□□□ 0.19
RTN3-214ENST00000545432 SEC24AO95486 1093 aa16.23■□□□□ 0.19
RTN3-214ENST00000545432 LRG1P02750 347 aa16.23■□□□□ 0.19
RTN3-214ENST00000545432 DMWDQ09019 674 aa16.23■□□□□ 0.19
RTN3-214ENST00000545432 PRPF4BQ13523 1007 aaKnown RBP16.23■□□□□ 0.19
RTN3-214ENST00000545432 WDR44Q5JSH3 913 aa16.23■□□□□ 0.19
RTN3-214ENST00000545432 EEF1DP3Q658K8 133 aa16.23■□□□□ 0.19
RTN3-214ENST00000545432 TPGS2Q68CL5 300 aa16.23■□□□□ 0.19
RTN3-214ENST00000545432 CHAMP1Q96JM3 812 aa16.23■□□□□ 0.19
RTN3-214ENST00000545432 MTMR9Q96QG7 549 aa16.23■□□□□ 0.19
RTN3-214ENST00000545432 NCANO14594 1321 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 STK36Q9NRP7 1315 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 SMIM28A0A1B0GU29 152 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 CHURC1-FNTBB4DL54 471 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 SYN3O14994 580 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 USO1O60763 962 aaKnown RBP16.22■□□□□ 0.19
RTN3-214ENST00000545432 GDI1P31150 447 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 NAMPTP43490 491 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 BRCC3P46736 316 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 FNTBP49356 437 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 MAPK6Q16659 721 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 DCAF4L1Q3SXM0 396 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 N4BP2L1Q5TBK1 243 aaPredicted RBP16.22■□□□□ 0.19
RTN3-214ENST00000545432 PRR23BQ6ZRT6 265 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 ZBTB8OSQ8IWT0 167 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 LEMD2Q8NC56 503 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 BSNDQ8WZ55 320 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 E2F7Q96AV8 911 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 LOXL4Q96JB6 756 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 CORO1BQ9BR76 489 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 ADPGKQ9BRR6 497 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 TM6SF1Q9BZW5 370 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 TTC12Q9H892 705 aaPredicted RBP16.22■□□□□ 0.19
RTN3-214ENST00000545432 CEP72Q9P209 647 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 INSL5Q9Y5Q6 135 aa16.22■□□□□ 0.19
RTN3-214ENST00000545432 ZNF263O14978 683 aa16.21■□□□□ 0.19
RTN3-214ENST00000545432 PRKCBP05771 671 aa16.21■□□□□ 0.19
RTN3-214ENST00000545432 CCNE1P24864 410 aa16.21■□□□□ 0.19
RTN3-214ENST00000545432 ELF1P32519 619 aa16.21■□□□□ 0.19
RTN3-214ENST00000545432 VIPR2P41587 438 aa16.21■□□□□ 0.19
RTN3-214ENST00000545432 FCHO2Q0JRZ9 810 aa16.21■□□□□ 0.19
RTN3-214ENST00000545432 CYP4A22Q5TCH4 519 aa16.21■□□□□ 0.19
RTN3-214ENST00000545432 PDZD4Q76G19 769 aaPredicted RBP16.21■□□□□ 0.19
RTN3-214ENST00000545432 SKAP1Q86WV1 359 aa16.21■□□□□ 0.19
RTN3-214ENST00000545432 LRRC3Q9BY71 257 aa16.21■□□□□ 0.19
RTN3-214ENST00000545432 GPR88Q9GZN0 384 aa16.21■□□□□ 0.19
RTN3-214ENST00000545432 C8orf33Q9H7E9 229 aaPredicted RBP16.21■□□□□ 0.19
RTN3-214ENST00000545432 GJB4Q9NTQ9 266 aa16.21■□□□□ 0.19
RTN3-214ENST00000545432 USP20Q9Y2K6 914 aa16.21■□□□□ 0.19
RTN3-214ENST00000545432 BAHCC1Q9P281 2608 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 A0A087WWV3 80 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 CCDC163A0A0D9SF12 145 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 MYBPHLA2RUH7 354 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 FAM205CA6NFA0 338 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 CHADO15335 359 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 ZNF806P0C7X5 589 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 XBP1P17861 261 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 CYP11B2P19099 503 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 SOX4Q06945 474 aaPredicted RBP16.2■□□□□ 0.18
RTN3-214ENST00000545432 SRSF5Q13243 272 aaKnown RBP16.2■□□□□ 0.18
RTN3-214ENST00000545432 DGKKQ5KSL6 1271 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 NT5DC1Q5TFE4 455 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 WDR5BQ86VZ2 330 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 CATSPER3Q86XQ3 398 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 FAM160A2Q8N612 972 aaPredicted RBP16.2■□□□□ 0.18
RTN3-214ENST00000545432 CYP4F11Q9HBI6 524 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 GOLGA2P5Q9HBQ8 144 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 TUFT1Q9NNX1 390 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 AFF4Q9UHB7 1163 aaKnown RBP16.2■□□□□ 0.18
RTN3-214ENST00000545432 FBXL5Q9UKA1 691 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 TNFSF13BQ9Y275 285 aa16.2■□□□□ 0.18
RTN3-214ENST00000545432 H7C4K7 107 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 I3L4J1 428 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms