RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 RINT1Q6NUQ1 792 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 NETO1Q8TDF5 533 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 NELL1Q92832 810 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 MMTAG2Q9BU76 263 aaKnown RBP17.79■□□□□ 0.44
DDX55-212ENST00000544738 KIFC3Q9BVG8 833 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 GPR62Q9BZJ7 368 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 TMEM134Q9H6X4 195 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 FNIP2Q9P278 1114 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 TNFSF13BQ9Y275 285 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 FAM208BQ5VWN6 2430 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 MIA3Q5JRA6 1907 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 COL4A3Q01955 1670 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 F8W810 466 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 PTGESO14684 152 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 HIP1RO75146 1068 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 RPL17P18621 184 aaKnown RBP17.78■□□□□ 0.44
DDX55-212ENST00000544738 TARSP26639 723 aaKnown RBP17.78■□□□□ 0.44
DDX55-212ENST00000544738 PFKPQ01813 784 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 DMWDQ09019 674 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 HYIQ5T013 277 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 NT5DC1Q5TFE4 455 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 EEF1DP3Q658K8 133 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 LILRA6Q6PI73 481 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 RSPO2Q6UXX9 243 aaPredicted RBP17.78■□□□□ 0.44
DDX55-212ENST00000544738 TPRG1Q6ZUI0 275 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 C1orf186Q6ZWK4 172 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 MTSS1LQ765P7 747 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 NELL2Q99435 816 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 KXD1Q9BQD3 176 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 KMT5AQ9NQR1 393 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 USP20Q9Y2K6 914 aa17.78■□□□□ 0.44
DDX55-212ENST00000544738 VWA3AA6NCI4 1184 aa17.77■□□□□ 0.44
DDX55-212ENST00000544738 ZMYND10O75800 440 aa17.77■□□□□ 0.44
DDX55-212ENST00000544738 PAPLNO95428 1278 aa17.77■□□□□ 0.44
DDX55-212ENST00000544738 EDN1P05305 212 aa17.77■□□□□ 0.44
DDX55-212ENST00000544738 GUCY2CP25092 1073 aa17.77■□□□□ 0.44
DDX55-212ENST00000544738 ELAVL2Q12926 359 aaKnown RBP17.77■□□□□ 0.44
DDX55-212ENST00000544738 ZRSR1Q15695 479 aaKnown RBP17.77■□□□□ 0.44
DDX55-212ENST00000544738 DAW1Q8N136 415 aa17.77■□□□□ 0.44
DDX55-212ENST00000544738 FGF13Q92913 245 aa17.77■□□□□ 0.44
DDX55-212ENST00000544738 CLDN23Q96B33 292 aa17.77■□□□□ 0.44
DDX55-212ENST00000544738 CDK5RAP3Q96JB5 506 aa17.77■□□□□ 0.44
DDX55-212ENST00000544738 RUSC1Q9BVN2 902 aa17.77■□□□□ 0.44
DDX55-212ENST00000544738 MRPL4Q9BYD3 311 aaKnown RBP17.77■□□□□ 0.44
DDX55-212ENST00000544738 KCND2Q9NZV8 630 aa17.77■□□□□ 0.44
DDX55-212ENST00000544738 ARHGAP28Q9P2N2 729 aa17.77■□□□□ 0.44
DDX55-212ENST00000544738 POLIQ9UNA4 740 aa17.77■□□□□ 0.44
DDX55-212ENST00000544738 GDAQ9Y2T3 454 aa17.77■□□□□ 0.44
DDX55-212ENST00000544738 DOCK6Q96HP0 2047 aa17.76■□□□□ 0.43
DDX55-212ENST00000544738 SLC26A4O43511 780 aa17.76■□□□□ 0.43
DDX55-212ENST00000544738 BMP15O95972 392 aa17.76■□□□□ 0.43
DDX55-212ENST00000544738 SMTNP53814 917 aa17.76■□□□□ 0.43
DDX55-212ENST00000544738 YARSP54577 528 aaKnown RBP17.76■□□□□ 0.43
DDX55-212ENST00000544738 MTAPQ13126 283 aa17.76■□□□□ 0.43
DDX55-212ENST00000544738 PDXDC1Q6P996 788 aa17.76■□□□□ 0.43
DDX55-212ENST00000544738 PRR23BQ6ZRT6 265 aa17.76■□□□□ 0.43
DDX55-212ENST00000544738 KCNK18Q7Z418 384 aa17.76■□□□□ 0.43
DDX55-212ENST00000544738 BRAPQ7Z569 592 aa17.76■□□□□ 0.43
DDX55-212ENST00000544738 SYT2Q8N9I0 419 aaPredicted RBP17.76■□□□□ 0.43
DDX55-212ENST00000544738 RABGGTAQ92696 567 aa17.76■□□□□ 0.43
DDX55-212ENST00000544738 AK8Q96MA6 479 aa17.76■□□□□ 0.43
DDX55-212ENST00000544738 ACO2Q99798 780 aaKnown RBP17.76■□□□□ 0.43
DDX55-212ENST00000544738 NTPCRQ9BSD7 190 aaKnown RBP17.76■□□□□ 0.43
DDX55-212ENST00000544738 TTPALQ9BTX7 342 aa17.76■□□□□ 0.43
DDX55-212ENST00000544738 CCDC94Q9BW85 323 aaPredicted RBP17.76■□□□□ 0.43
DDX55-212ENST00000544738 FAM126AQ9BYI3 521 aaPredicted RBP17.76■□□□□ 0.43
DDX55-212ENST00000544738 TOPORSQ9NS56 1045 aaPredicted RBP17.76■□□□□ 0.43
DDX55-212ENST00000544738 ANGPTL2Q9UKU9 493 aa17.76■□□□□ 0.43
DDX55-212ENST00000544738 FRYQ5TBA9 3013 aa17.76■□□□□ 0.43
DDX55-212ENST00000544738 CASTOR2A6NHX0 329 aa17.75■□□□□ 0.43
DDX55-212ENST00000544738 GRM5P41594 1212 aa17.75■□□□□ 0.43
DDX55-212ENST00000544738 NRLP54845 237 aa17.75■□□□□ 0.43
DDX55-212ENST00000544738 MAPK7Q13164 816 aa17.75■□□□□ 0.43
DDX55-212ENST00000544738 NAB2Q15742 525 aa17.75■□□□□ 0.43
DDX55-212ENST00000544738 LAIR1Q6GTX8 287 aa17.75■□□□□ 0.43
DDX55-212ENST00000544738 ZNF852Q6ZMS4 543 aa17.75■□□□□ 0.43
DDX55-212ENST00000544738 CELF5Q8N6W0 485 aaKnown RBP17.75■□□□□ 0.43
DDX55-212ENST00000544738 ITFG1Q8TB96 612 aa17.75■□□□□ 0.43
DDX55-212ENST00000544738 SPIRE2Q8WWL2 714 aa17.75■□□□□ 0.43
DDX55-212ENST00000544738 UROC1Q96N76 676 aa17.75■□□□□ 0.43
DDX55-212ENST00000544738 PNMA5Q96PV4 448 aa17.75■□□□□ 0.43
DDX55-212ENST00000544738 PAAF1Q9BRP4 392 aa17.75■□□□□ 0.43
DDX55-212ENST00000544738 PRMT8Q9NR22 394 aaPredicted RBP17.75■□□□□ 0.43
DDX55-212ENST00000544738 ANKRD11Q6UB99 2663 aaPredicted RBP17.75■□□□□ 0.43
DDX55-212ENST00000544738 CEP295Q9C0D2 2601 aa17.74■□□□□ 0.43
DDX55-212ENST00000544738 CCL16O15467 120 aa17.74■□□□□ 0.43
DDX55-212ENST00000544738 GDF9O60383 454 aa17.74■□□□□ 0.43
DDX55-212ENST00000544738 KIF4AO95239 1232 aa17.74■□□□□ 0.43
DDX55-212ENST00000544738 RETP07949 1114 aa17.74■□□□□ 0.43
DDX55-212ENST00000544738 RPS9P46781 194 aaKnown RBP17.74■□□□□ 0.43
DDX55-212ENST00000544738 STRN3Q13033 797 aa17.74■□□□□ 0.43
DDX55-212ENST00000544738 ZNF568Q3ZCX4 644 aa17.74■□□□□ 0.43
DDX55-212ENST00000544738 FAM171A1Q5VUB5 890 aa17.74■□□□□ 0.43
DDX55-212ENST00000544738 PIK3R5Q8WYR1 880 aa17.74■□□□□ 0.43
DDX55-212ENST00000544738 PPP1R10Q96QC0 940 aaKnown RBP17.74■□□□□ 0.43
DDX55-212ENST00000544738 TCHPQ9BT92 498 aa17.74■□□□□ 0.43
DDX55-212ENST00000544738 PTPRHQ9HD43 1115 aa17.74■□□□□ 0.43
DDX55-212ENST00000544738 SEMA4GQ9NTN9 838 aa17.74■□□□□ 0.43
DDX55-212ENST00000544738 MRPS17Q9Y2R5 130 aaKnown RBP17.74■□□□□ 0.43
DDX55-212ENST00000544738 SFI1A8K8P3 1242 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms