RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 ZBBXA8MT70 800 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 MSH4O15457 936 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 HSPA4LO95757 839 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 TARSP26639 723 aaKnown RBP13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 YWHABP31946 246 aaKnown RBP13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 NUDCD3Q8IVD9 361 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 WDR75Q8IWA0 830 aaKnown RBP13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 SLC20A1Q8WUM9 679 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 RPF1Q9H9Y2 349 aaKnown RBP13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 BLOC1S4Q9NUP1 217 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 SCINQ9Y6U3 715 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 NUP188Q5SRE5 1749 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 RALAP11233 206 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 EEF1B2P24534 225 aaKnown RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 DHX34Q14147 1143 aaKnown RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 SNRNP35Q16560 246 aaKnown RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 ZNF568Q3ZCX4 644 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 CENPPQ6IPU0 288 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 KRT80Q6KB66 452 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 ATL2Q8NHH9 583 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 CBWD1Q9BRT8 395 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 FGFBP2Q9BYJ0 223 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 STOML1Q9UBI4 398 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 TSR3Q9UJK0 312 aaKnown RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 AGO2Q9UKV8 859 aaKnown RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 ARL2BPQ9Y2Y0 163 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 FAM86B1E9PN63 330 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 PIAS1O75925 651 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 MYCP01106 439 aaPredicted RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 FAM86B2P0C5J1 330 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 SMARCA1P28370 1054 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 R3HDM1Q15032 1099 aaKnown RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 SCFD1Q8WVM8 642 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 POLR3FQ9H1D9 316 aaPredicted RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 RIOX1Q9H6W3 641 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 ABCF3Q9NUQ8 709 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 PIM2Q9P1W9 311 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 ROBO1Q9Y6N7 1651 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 CNTRLQ7Z7A1 2325 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 BCL9LQ86UU0 1499 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 BCAR1P56945 870 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 POU5F1BQ06416 359 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 HIF1AQ16665 826 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 FAM160B1Q5W0V3 765 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 AADACL2Q6P093 401 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 DHX38Q92620 1227 aaKnown RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 RBM41Q96IZ5 413 aaKnown RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 SUFUQ9UMX1 484 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 NEU2Q9Y3R4 380 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 M0QYV0 167 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 NFIBO00712 420 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 DNAJC6O75061 913 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 RTN2O75298 545 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 CCND2P30279 289 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 NLRP11P59045 1033 aaKnown RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 OCRLQ01968 901 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 RNASELQ05823 741 aaKnown RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 BAATQ14032 418 aaPredicted RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 MAP3K21Q5TCX8 1036 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 RWDD4Q6NW29 188 aaKnown RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 SGSM3Q96HU1 749 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 OSBPL8Q9BZF1 889 aa13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 DHX35Q9H5Z1 703 aaKnown RBP13.68□□□□□ -0.22
TUBGCP2-210ENST00000543663 PHF2O75151 1096 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 CDH16O75309 829 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 CSDE1O75534 798 aaKnown RBP13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 SGPL1O95470 568 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 GARSP41250 739 aaKnown RBP13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 ARPP19P56211 112 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 ECM1Q16610 540 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 MAPK6Q16659 721 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 KCNT1Q5JUK3 1230 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 C15orf52Q6ZUT6 534 aaKnown RBP13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 CBWD2Q8IUF1 395 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 MCEEQ96PE7 176 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 FAM198AQ9UFP1 575 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 PAPPAQ13219 1627 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 ESYT2A0FGR8 921 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 TISP43B9A030 160 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 FGRP09769 529 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 CASP5P51878 434 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 ERVK-9P63128 1117 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 DPP9Q86TI2 863 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 MICALL2Q8IY33 904 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 LRGUKQ96M69 825 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 NOD2Q9HC29 1040 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 EML1O00423 815 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 NEMP1O14524 444 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 CALCAP01258 141 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 IFI35P80217 286 aaPredicted RBP13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 CREG2Q8IUH2 290 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 TRIM56Q9BRZ2 755 aaKnown RBP13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 SNX25Q9H3E2 840 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 RAB6BQ9NRW1 208 aa13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 KLHL8Q9P2G9 620 aaPredicted RBP13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 APOBEC2Q9Y235 224 aaKnown RBP13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 COL1A1P02452 1464 aaPredicted RBP13.67□□□□□ -0.22
TUBGCP2-210ENST00000543663 PPP1R11O60927 126 aaPredicted RBP13.66□□□□□ -0.22
TUBGCP2-210ENST00000543663 AGTP01019 485 aa13.66□□□□□ -0.22
TUBGCP2-210ENST00000543663 RPA1P27694 616 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms