RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 LCA5LO95447 670 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 FAM86B2P0C5J1 330 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 RSPH10BP0C881 870 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 IDO1P14902 403 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 MAGEA1P43355 309 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 NOVP48745 357 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 CDK7P50613 346 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 CASP5P51878 434 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 GFPT1Q06210 699 aaPredicted RBP11.98□□□□□ -0.49
CDH4-201ENST00000543233 EHHADHQ08426 723 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 KIF22Q14807 665 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 CLPPQ16740 277 aaPredicted RBP11.98□□□□□ -0.49
CDH4-201ENST00000543233 TMEM259Q4ZIN3 620 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 STRIP1Q5VSL9 837 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 SATL1Q86VE3 508 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 DNAJC19Q96DA6 116 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 ERLEC1Q96DZ1 483 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 SH3GL1Q99961 368 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 AMNQ9BXJ7 453 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 AP1M1Q9BXS5 423 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.98□□□□□ -0.49
CDH4-201ENST00000543233 ARHGAP20Q9P2F6 1191 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 RBMX2Q9Y388 322 aaKnown RBP11.98□□□□□ -0.49
CDH4-201ENST00000543233 hCG_1984214I3L0E3 225 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 DDX39AO00148 427 aaKnown RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 PRLRP16471 622 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 RASSF2P50749 326 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 POLR2FP61218 127 aaKnown RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 DCTN2Q13561 401 aaKnown RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 EAPPQ56P03 285 aaPredicted RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 RFX8Q6ZV50 586 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 GUF1Q8N442 669 aaKnown RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 AKT1S1Q96B36 256 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 NOX5Q96PH1 765 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 TBC1D10AQ9BXI6 508 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 UBR3Q6ZT12 1888 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 CLIC2O15247 247 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 BMP3P12645 472 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 RXRGP48443 463 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 CLK2P49760 499 aaKnown RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 CUL1Q13616 776 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 CTTNQ14247 550 aaKnown RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 MAN2A1Q16706 1144 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 KHDC1Q4VXA5 237 aaKnown RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 DCAF17Q5H9S7 520 aaPredicted RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 FAM83BQ5T0W9 1011 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 CATSPER3Q86XQ3 398 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 SLC7A5P1Q8MH63 180 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 CCDC127Q96BQ5 260 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 CCT7Q99832 543 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 LSM14BQ9BX40 385 aaKnown RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 TTYH3Q9C0H2 523 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 BHMT2Q9H2M3 363 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 ZNF277Q9NRM2 450 aaPredicted RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 FBXO28Q9NVF7 368 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 ATAD3AQ9NVI7 634 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 PPP1R1BQ9UD71 204 aaPredicted RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 ZBTB21Q9ULJ3 1066 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 LY75O60449 1722 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 PVALEFA0A1B0GWK0 134 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 OXSR1O95747 527 aaPredicted RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 LMNAP02545 664 aaKnown RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 RAPGEF1Q13905 1077 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 TBC1D10BQ4KMP7 808 aaPredicted RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 TMEM119Q4V9L6 283 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 ISLR2Q6UXK2 745 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 PACS1Q6VY07 963 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 SMC6Q96SB8 1091 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 ZNF184Q99676 751 aaPredicted RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 SH2D3AQ9BRG2 576 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 STK33Q9BYT3 514 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 DDX47Q9H0S4 455 aaKnown RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 DHX36Q9H2U1 1008 aaKnown RBP11.97□□□□□ -0.49
CDH4-201ENST00000543233 BCS1LQ9Y276 419 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 ZNF831Q5JPB2 1677 aa11.97□□□□□ -0.49
CDH4-201ENST00000543233 TTLL13PA6NNM8 815 aa11.96□□□□□ -0.49
CDH4-201ENST00000543233 YDJCA8MPS7 323 aa11.96□□□□□ -0.49
CDH4-201ENST00000543233 KIF11P52732 1056 aa11.96□□□□□ -0.49
CDH4-201ENST00000543233 PUS10Q3MIT2 529 aaKnown RBP11.96□□□□□ -0.49
CDH4-201ENST00000543233 LRRC55Q6ZSA7 311 aa11.96□□□□□ -0.49
CDH4-201ENST00000543233 TMEM179Q6ZVK1 233 aa11.96□□□□□ -0.49
CDH4-201ENST00000543233 TPH2Q8IWU9 490 aa11.96□□□□□ -0.49
CDH4-201ENST00000543233 SLC43A3Q8NBI5 491 aa11.96□□□□□ -0.49
CDH4-201ENST00000543233 PURBQ96QR8 312 aaKnown RBP11.96□□□□□ -0.49
CDH4-201ENST00000543233 ASCC2Q9H1I8 757 aaPredicted RBP11.96□□□□□ -0.49
CDH4-201ENST00000543233 EMILIN3Q9NT22 766 aa11.96□□□□□ -0.49
CDH4-201ENST00000543233 PPP1R9AQ9ULJ8 1098 aa11.96□□□□□ -0.49
CDH4-201ENST00000543233 CDK5RAP2Q96SN8 1893 aa11.96□□□□□ -0.49
CDH4-201ENST00000543233 PLIN4Q96Q06 1357 aa11.96□□□□□ -0.5
CDH4-201ENST00000543233 DNAJC6O75061 913 aa11.96□□□□□ -0.5
CDH4-201ENST00000543233 COL6A2P12110 1019 aa11.96□□□□□ -0.5
CDH4-201ENST00000543233 ACTN1P12814 892 aa11.96□□□□□ -0.5
CDH4-201ENST00000543233 NAA20P61599 178 aa11.96□□□□□ -0.5
CDH4-201ENST00000543233 KCNA1Q09470 495 aa11.96□□□□□ -0.5
CDH4-201ENST00000543233 KIAA1755Q5JYT7 1200 aa11.96□□□□□ -0.5
CDH4-201ENST00000543233 DENND2CQ68D51 928 aa11.96□□□□□ -0.5
CDH4-201ENST00000543233 PATL1Q86TB9 770 aaKnown RBP11.96□□□□□ -0.5
CDH4-201ENST00000543233 SFR1Q86XK3 245 aa11.96□□□□□ -0.5
CDH4-201ENST00000543233 ENDOVQ8N8Q3 282 aaKnown RBP11.96□□□□□ -0.5
CDH4-201ENST00000543233 MYLK2Q9H1R3 596 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms