RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 DPP3Q9NY33 737 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 CEP72Q9P209 647 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 APEX2Q9UBZ4 518 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 ITGA11Q9UKX5 1188 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 UBQLN1Q9UMX0 589 aaKnown RBP11.51□□□□□ -0.57
DDB1-221ENST00000543162 R3HCC1Q9Y3T6 440 aaKnown RBP11.51□□□□□ -0.57
DDB1-221ENST00000543162 TET1Q8NFU7 2136 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 ARL5CA6NH57 179 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 MFAP3LO75121 409 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 LRRN2O75325 713 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 ITGB3P05106 788 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 KRT19P08727 400 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 CSF2RAP15509 400 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 RFX1P22670 979 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 ITGB8P26012 769 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 KRT9P35527 623 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 ADKP55263 362 aaKnown RBP11.5□□□□□ -0.57
DDB1-221ENST00000543162 ZBED6P86452 979 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 GOLGA8FQ08AF8 430 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 GOLGA8DPQ0D2H9 430 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 IKBKEQ14164 716 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 ZBTB6Q15916 424 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 TCTN1Q2MV58 587 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 SGSM1Q2NKQ1 1148 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 DPY19L2P1Q6NXN4 242 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 GLB1LQ6UWU2 654 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 C7orf61Q8IZ16 206 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 RPUSD2Q8IZ73 545 aaKnown RBP11.5□□□□□ -0.57
DDB1-221ENST00000543162 C1orf127Q8N9H9 656 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 C18orf25Q96B23 403 aaPredicted RBP11.5□□□□□ -0.57
DDB1-221ENST00000543162 ZFP42Q96MM3 310 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 PI4K2AQ9BTU6 479 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 HTATIP2Q9BUP3 242 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 NLRC4Q9NPP4 1024 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 RNF19AQ9NV58 838 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 SLC38A7Q9NVC3 462 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 RNF216Q9NWF9 866 aaPredicted RBP11.5□□□□□ -0.57
DDB1-221ENST00000543162 TMEM161AQ9NX61 479 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 TUBGCP4Q9UGJ1 667 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 SIX4Q9UIU6 781 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 FBXL5Q9UKA1 691 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 LRFN2Q9ULH4 789 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 DAAM1Q9Y4D1 1078 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 PCDHB7Q9Y5E2 793 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.5□□□□□ -0.57
DDB1-221ENST00000543162 FHOD1Q9Y613 1164 aa11.5□□□□□ -0.57
DDB1-221ENST00000543162 PDCD11Q14690 1871 aaKnown RBP11.49□□□□□ -0.57
DDB1-221ENST00000543162 ALPK3Q96L96 1907 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 CCDC85CA6NKD9 419 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 RNF225M0QZC1 329 aaPredicted RBP11.49□□□□□ -0.57
DDB1-221ENST00000543162 PTGESO14684 152 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 ASS1P00966 412 aaKnown RBP11.49□□□□□ -0.57
DDB1-221ENST00000543162 CST3P01034 146 aaPredicted RBP11.49□□□□□ -0.57
DDB1-221ENST00000543162 THP07101 528 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 PFKMP08237 780 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 CYP3A5P20815 502 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 POLR2BP30876 1174 aaKnown RBP11.49□□□□□ -0.57
DDB1-221ENST00000543162 GUCY2FP51841 1108 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 MYL6P60660 151 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 RBP5P82980 135 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 RAPGEF1Q13905 1077 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 ARID5BQ14865 1188 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 TSR1Q2NL82 804 aaKnown RBP11.49□□□□□ -0.57
DDB1-221ENST00000543162 ZNF699Q32M78 642 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 IQCEQ6IPM2 695 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 PHLDB3Q6NSJ2 640 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 GJB7Q6PEY0 223 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 RRAGAQ7L523 313 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 ARHGEF19Q8IW93 802 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 PPM1KQ8N3J5 372 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 TC2NQ8N9U0 490 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 OR8K1Q8NGG5 319 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 TAF4BQ92750 862 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 PPP1R10Q96QC0 940 aaKnown RBP11.49□□□□□ -0.57
DDB1-221ENST00000543162 SPAG5Q96R06 1193 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 NUCKS1Q9H1E3 243 aaKnown RBP11.49□□□□□ -0.57
DDB1-221ENST00000543162 ELAC1Q9H777 363 aaKnown RBP11.49□□□□□ -0.57
DDB1-221ENST00000543162 UBE2TQ9NPD8 197 aaPredicted RBP11.49□□□□□ -0.57
DDB1-221ENST00000543162 DNAJC12Q9UKB3 198 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 AGAP1Q9UPQ3 857 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 INPP5FQ9Y2H2 1132 aa11.49□□□□□ -0.57
DDB1-221ENST00000543162 ABHD14A-ACY1A0A1B0GW23 586 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.48□□□□□ -0.57
DDB1-221ENST00000543162 EVI5O60447 810 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 OFD1O75665 1012 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 ATICP31939 592 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 SCNN1GP51170 649 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 MFAP3P55082 362 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 NOP14P78316 857 aaKnown RBP11.48□□□□□ -0.57
DDB1-221ENST00000543162 MYO1EQ12965 1108 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 PPIGQ13427 754 aaKnown RBP eCLIP11.48□□□□□ -0.572e-12■■■■□ 22.1
DDB1-221ENST00000543162 SCARA3Q6AZY7 606 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 SPOPLQ6IQ16 392 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 PDXDC1Q6P996 788 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 NPAS4Q8IUM7 802 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 ABI1Q8IZP0 508 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 TMEM130Q8N3G9 435 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 GSTCDQ8NEC7 633 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 CXorf38Q8TB03 319 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 URGCPQ8TCY9 931 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms