RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 C3orf20Q8ND61 904 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 ASAP3Q8TDY4 903 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 CPA5Q8WXQ8 436 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 KIF12Q96FN5 646 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 C21orf2O43822 256 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 CORO7P57737 925 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 MAP3K10Q02779 954 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 AGR3Q8TD06 166 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 AURKCQ9UQB9 309 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 APOA1P02647 267 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 MAGEA4P43358 317 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 IRX1P78414 480 aaPredicted RBP13.79□□□□□ -0.2
TNC-212ENST00000542877 CYTH1Q15438 398 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 RBBP7Q16576 425 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 DNAJC9Q8WXX5 260 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 MAP3K14Q99558 947 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 MMTAG2Q9BU76 263 aaKnown RBP13.79□□□□□ -0.2
TNC-212ENST00000542877 JPH1Q9HDC5 661 aaPredicted RBP13.79□□□□□ -0.2
TNC-212ENST00000542877 KLHL11Q9NVR0 708 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 CRB1P82279 1406 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 UBA6A0AVT1 1052 aaPredicted RBP13.79□□□□□ -0.2
TNC-212ENST00000542877 APRTP07741 180 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 LMBRD2Q68DH5 695 aaPredicted RBP13.79□□□□□ -0.2
TNC-212ENST00000542877 USP49Q70CQ1 688 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 MRPL1Q9BYD6 325 aaKnown RBP13.79□□□□□ -0.2
TNC-212ENST00000542877 OSBPL8Q9BZF1 889 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 RAB6BQ9NRW1 208 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 C3orf70A6NLC5 250 aaPredicted RBP13.78□□□□□ -0.2
TNC-212ENST00000542877 PPP1R3GB7ZBB8 358 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 COMTP21964 271 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 COPB2P35606 906 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 SNRNP35Q16560 246 aaKnown RBP13.78□□□□□ -0.2
TNC-212ENST00000542877 WDR72Q3MJ13 1102 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 TEX2Q8IWB9 1127 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 KRT35Q92764 455 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 THAP11Q96EK4 314 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 UNC45AQ9H3U1 944 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 CCDC134Q9H6E4 229 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 H0Y626 953 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 TRIM16O95361 564 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 PRKCBP05771 671 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 SLC9A1P19634 815 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 PTK7Q13308 1070 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 XKR3Q5GH77 459 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 KCNV1Q6PIU1 500 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 REXO1L1PQ8IX06 675 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 SPATA33Q96N06 139 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 SMARCAL1Q9NZC9 954 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 ALG6Q9Y672 507 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 C16orf96A6NNT2 1141 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 PYGLP06737 847 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 PDGFRAP16234 1089 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 KCNA3P22001 575 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 SSTR3P32745 418 aaPredicted RBP13.78□□□□□ -0.2
TNC-212ENST00000542877 SPP2Q13103 211 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 SGSM1Q2NKQ1 1148 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 PRUNE1Q86TP1 453 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 ATXN7L3BQ96GX2 97 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 ZC4H2Q9NQZ6 224 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 PAK5Q9P286 719 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 CDC42BPBQ9Y5S2 1711 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 GTPBP10A4D1E9 387 aaKnown RBP13.78□□□□□ -0.2
TNC-212ENST00000542877 RANBP1P43487 201 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 TPI1P60174 286 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 DAB2P98082 770 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 BTBD8Q5XKL5 378 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 KDM7AQ6ZMT4 941 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 SZRD1Q7Z422 152 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 RBBP8NLQ8NC74 664 aaPredicted RBP13.78□□□□□ -0.2
TNC-212ENST00000542877 LZICQ8WZA0 190 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 TSPAN17Q96FV3 270 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 PCDHB2Q9Y5E7 798 aa13.78□□□□□ -0.2
TNC-212ENST00000542877 SNRPAP09012 282 aaKnown RBP13.77□□□□□ -0.2
TNC-212ENST00000542877 MYBP10242 640 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 KLRC1P26715 233 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 ZC3H12BQ5HYM0 836 aaKnown RBP13.77□□□□□ -0.2
TNC-212ENST00000542877 KLHDC7AQ5VTJ3 777 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 LRRC8BQ6P9F7 803 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 SLC30A9Q6PML9 568 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 ZNF677Q86XU0 584 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 SCFD1Q8WVM8 642 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 SIK2Q9H0K1 926 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 PLEKHA5Q9HAU0 1116 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 SLC40A1Q9NP59 571 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 CTDNEP1O95476 244 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 HNRNPCP07910 306 aaKnown RBP eCLIP13.77□□□□□ -0.2
TNC-212ENST00000542877 LCP1P13796 627 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.2
TNC-212ENST00000542877 SEC24CP53992 1094 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 MRPS35P82673 323 aaKnown RBP13.77□□□□□ -0.2
TNC-212ENST00000542877 KYNUQ16719 465 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 MDH1BQ5I0G3 518 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 WDR93Q6P2C0 686 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 ELMSAN1Q6PJG2 1045 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 COL23A1Q86Y22 540 aaPredicted RBP13.77□□□□□ -0.2
TNC-212ENST00000542877 SP8Q8IXZ3 490 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 CXorf56Q9H5V9 222 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 RUBCNLQ9H714 662 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 AIPL1Q9NZN9 384 aa13.77□□□□□ -0.2
TNC-212ENST00000542877 KRT16P08779 473 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms