RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 ERGIC2Q96RQ1 377 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 TSPAN18Q96SJ8 248 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 FAM213AQ9BRX8 229 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 HAPLN2Q9GZV7 340 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CPSF3Q9UKF6 684 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 NOC2LQ9Y3T9 749 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 DAAM1Q9Y4D1 1078 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CITO14578 2027 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 TMEM221A6NGB7 291 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 M0R296 226 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 IL18RAPO95256 599 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ADRB2P07550 413 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PBX1P40424 430 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 GRM5P41594 1212 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 RAB27AP51159 221 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 KCNH2Q12809 1159 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PAK2Q13177 524 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ZNF618Q5T7W0 954 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 EEF1DP3Q658K8 133 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TRAF7Q6Q0C0 670 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 CRELD2Q6UXH1 353 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 LRRC8DQ7L1W4 858 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 NT5DC4Q86YG4 428 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 CREBRFQ8IUR6 639 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 VSTM4Q8IW00 320 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 SUGP1Q8IWZ8 645 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 CD302Q8IX05 232 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PARD3BQ8TEW8 1205 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ZBTB45Q96K62 511 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PPP1R9BQ96SB3 815 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 FTHL17Q9BXU8 183 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 VPS16Q9H269 839 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ERVK-5Q9HDB9 667 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 INTS13Q9NVM9 706 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 RBAKQ9NYW8 714 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 IMPACTQ9P2X3 320 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PIN4Q9Y237 131 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 SPTBN2O15020 2390 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ANK1P16157 1881 aa13.33□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 CSDE1O75534 798 aaKnown RBP13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 SKIP12755 728 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 UBXN1Q04323 297 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 CETN1Q12798 172 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TRIM14Q14142 442 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 LPIN1Q14693 890 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 DCAF17Q5H9S7 520 aaPredicted RBP13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TCERG1LQ5VWI1 586 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 SPECC1LQ69YQ0 1117 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 SMYD5Q6GMV2 418 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 WDR49Q8IV35 697 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 HACE1Q8IYU2 909 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 FBXL6Q8N531 539 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 APBB2Q92870 758 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 CPB2Q96IY4 423 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 FNBP1Q96RU3 617 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 SLC9A7Q96T83 725 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 CCDC94Q9BW85 323 aaPredicted RBP13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TRIM6Q9C030 488 aaPredicted RBP13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ASB7Q9H672 318 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PLEKHA5Q9HAU0 1116 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PADI3Q9ULW8 664 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ST3GAL5Q9UNP4 418 aa13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.32□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 GOLGA8IPA6NC78 632 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 GOLGA8JA6NMD2 632 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 H3BQ06 376 aaPredicted RBP13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PES1O00541 588 aaKnown RBP13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 HARSP12081 509 aaKnown RBP13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ZSCAN20P17040 1043 aaPredicted RBP13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 FGFR4P22455 802 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 RFC2P35250 354 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 FMO5P49326 533 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ACOT2P49753 483 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 FIGNQ5HY92 759 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TRIM67Q6ZTA4 783 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ZBTB33Q86T24 672 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 RDH13Q8NBN7 331 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PHOSPHO2Q8TCD6 241 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 CGRRF1Q99675 332 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 NUP58Q9BVL2 599 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 RPF1Q9H9Y2 349 aaKnown RBP13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TMEM8AQ9HCN3 771 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TOPORSQ9NS56 1045 aaPredicted RBP13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 USP20Q9Y2K6 914 aa13.31□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TET1Q8NFU7 2136 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PDCD11Q14690 1871 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 LRRIQ3A6PVS8 624 aaPredicted RBP13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TEX33O43247 280 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 NPTXRO95502 500 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PFKMP08237 780 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 STAG3L1P0CL83 205 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 GHRP10912 638 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 RFX1P22670 979 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 MXI1P50539 228 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 YARSP54577 528 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 VCPP55072 806 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 COL9A2Q14055 689 aaPredicted RBP13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 DSC3Q14574 896 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ENOX2Q16206 610 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms