RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 DOCK6Q96HP0 2047 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 B3GAT3O94766 335 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 PRR29P0C7W0 189 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 CMA1P23946 247 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 KLRC2P26717 231 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 LRPAP1P30533 357 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 ABCD1P33897 745 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 NDUFA8P51970 172 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 PPP2R3AQ06190 1150 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 BMS1Q14692 1282 aaKnown RBP12.54□□□□□ -0.4
C2CD3-217ENST00000542452 PSMD5Q16401 504 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 TPRNQ4KMQ1 711 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 FAM26FQ5R3K3 315 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 RARS2Q5T160 578 aaKnown RBP12.54□□□□□ -0.4
C2CD3-217ENST00000542452 JADE1Q6IE81 842 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 DCLRE1AQ6PJP8 1040 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 RSPO2Q6UXX9 243 aaPredicted RBP12.54□□□□□ -0.4
C2CD3-217ENST00000542452 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.54□□□□□ -0.4
C2CD3-217ENST00000542452 ADHFE1Q8IWW8 467 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 EFCAB13Q8IY85 973 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 SAAL1Q96ER3 474 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 KIF12Q96FN5 646 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 FBXL18Q96ME1 805 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 CLSTN3Q9BQT9 956 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 TTPALQ9BTX7 342 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 RPF1Q9H9Y2 349 aaKnown RBP12.54□□□□□ -0.4
C2CD3-217ENST00000542452 PLEKHA5Q9HAU0 1116 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 MAN1C1Q9NR34 630 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 SLC38A7Q9NVC3 462 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 FNIP2Q9P278 1114 aa12.54□□□□□ -0.4
C2CD3-217ENST00000542452 AGO2Q9UKV8 859 aaKnown RBP12.54□□□□□ -0.4
C2CD3-217ENST00000542452 TGM5O43548 720 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 SLFN14P0C7P3 912 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 SRGAP2BP0DMP2 458 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 ALCAMQ13740 583 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 SCARA3Q6AZY7 606 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 KIAA1841Q6NSI8 718 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 CEP57Q86XR8 500 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 GPR65Q8IYL9 337 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 GJD3Q8N144 294 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 FSIP1Q8NA03 581 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 POMGNT1Q8WZA1 660 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 PAGE5Q96GU1 130 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 LRRC27Q9C0I9 530 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 POMKQ9H5K3 350 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 DZANK1Q9NVP4 752 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 MTRRQ9UBK8 725 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 PRKAG3Q9UGI9 489 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 UBQLN1Q9UMX0 589 aaKnown RBP12.53□□□□□ -0.4
C2CD3-217ENST00000542452 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 ATP6V1DQ9Y5K8 247 aa12.53□□□□□ -0.4
C2CD3-217ENST00000542452 DOCK8Q8NF50 2099 aa12.52□□□□□ -0.4
C2CD3-217ENST00000542452 A0A1W2PQ27 194 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 A0A1W2PQ64 194 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 A0A1W2PQD8 194 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 GOLGA8IPA6NC78 632 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 GOLGA8JA6NMD2 632 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 EIF3DO15371 548 aaKnown RBP eCLIP12.52□□□□□ -0.41
C2CD3-217ENST00000542452 TGFB1I1O43294 461 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 RFPL2O75678 378 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 GLUD1P00367 558 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 ADH1AP07327 375 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 SPATA31D3P0C874 917 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 HOXB8P17481 243 aaPredicted RBP12.52□□□□□ -0.41
C2CD3-217ENST00000542452 CYP3A5P20815 502 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 NUCB2P80303 420 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 AMPD3Q01432 767 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 ELAVL2Q12926 359 aaKnown RBP12.52□□□□□ -0.41
C2CD3-217ENST00000542452 CBX2Q14781 532 aaPredicted RBP12.52□□□□□ -0.41
C2CD3-217ENST00000542452 KYAT1Q16773 422 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 SPATA1Q5VX52 437 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 SLFN12LQ6IEE8 588 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 LILRA6Q6PI73 481 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 TMC5Q6UXY8 1006 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 SPATA31D4Q6ZUB0 917 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 PPFIBP1Q86W92 1011 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 PALB2Q86YC2 1186 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 BRSK2Q8IWQ3 736 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 CEP57L1Q8IYX8 460 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 KIAA0895Q8NCT3 520 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 ZNF507Q8TCN5 953 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 SCFD1Q8WVM8 642 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 SCAND2PQ9GZW5 306 aaPredicted RBP12.52□□□□□ -0.41
C2CD3-217ENST00000542452 ADAM7Q9H2U9 754 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 PCIF1Q9H4Z3 704 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 SFXN1Q9H9B4 322 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.52□□□□□ -0.41
C2CD3-217ENST00000542452 FBXW11Q9UKB1 542 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 EXOC7Q9UPT5 735 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 FAM50BQ9Y247 325 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 SSX2IPQ9Y2D8 614 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 NOTCH4Q99466 2003 aa12.52□□□□□ -0.41
C2CD3-217ENST00000542452 LOC730098B7Z3J9 87 aa12.51□□□□□ -0.41
C2CD3-217ENST00000542452 SPTLC1O15269 473 aa12.51□□□□□ -0.41
C2CD3-217ENST00000542452 GARTP22102 1010 aa12.51□□□□□ -0.41
C2CD3-217ENST00000542452 SP100P23497 879 aaPredicted RBP12.51□□□□□ -0.41
C2CD3-217ENST00000542452 SSTR3P32745 418 aaPredicted RBP12.51□□□□□ -0.41
C2CD3-217ENST00000542452 RPL9P32969 192 aaKnown RBP12.51□□□□□ -0.41
C2CD3-217ENST00000542452 SYKP43405 635 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms