RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 ADRB2P07550 413 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 PDCP20941 246 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 ADSSP30520 456 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 ENOX2Q16206 610 aaKnown RBP8.4□□□□□ -1.06
NECAP1-205ENST00000541948 PSMD5Q16401 504 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 PTPN21Q16825 1174 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 FOXD4L6Q3SYB3 417 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-205ENST00000541948 AXDND1Q5T1B0 1012 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-205ENST00000541948 DCLRE1AQ6PJP8 1040 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 SHC4Q6S5L8 630 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 CRELD2Q6UXH1 353 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-205ENST00000541948 FOXD4L3Q6VB84 417 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-205ENST00000541948 CEP57Q86XR8 500 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 FBXL6Q8N531 539 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 MYCT1Q8N699 235 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 SPRYD3Q8NCJ5 442 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 CMASQ8NFW8 434 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-205ENST00000541948 RSAD2Q8WXG1 361 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 PBXIP1Q96AQ6 731 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 CALML4Q96GE6 196 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 CDK5RAP3Q96JB5 506 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 ACAP3Q96P50 834 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 MYADMQ96S97 322 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 EMILIN2Q9BXX0 1053 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 RHOBTB2Q9BYZ6 727 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 TSHZ2Q9NRE2 1034 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 LIMD1Q9UGP4 676 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 FBXW11Q9UKB1 542 aa8.4□□□□□ -1.06
NECAP1-205ENST00000541948 SCN1AP35498 2009 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 SF3B1O75533 1304 aaKnown RBP eCLIP8.39□□□□□ -1.07
NECAP1-205ENST00000541948 A0A0B4J269 797 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 FRMD3A2A2Y4 597 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 WDR27A2RRH5 827 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 TMEM221A6NGB7 291 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 LACTBL1A8MY62 500 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 M0R296 226 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 PODXLO00592 558 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 SPTLC1O15269 473 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 NR1I2O75469 434 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 ZMYND10O75800 440 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 B3GAT3O94766 335 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 BMP15O95972 392 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 ADH1AP07327 375 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 PDIA4P13667 645 aaKnown RBP8.39□□□□□ -1.07
NECAP1-205ENST00000541948 CASP1P29466 404 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 HOXD13P35453 343 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 VCPP55072 806 aaKnown RBP8.39□□□□□ -1.07
NECAP1-205ENST00000541948 RAB33AQ14088 237 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 MRPL58Q14197 206 aaKnown RBP8.39□□□□□ -1.07
NECAP1-205ENST00000541948 NOLC1Q14978 699 aaKnown RBP eCLIP8.39□□□□□ -1.07
NECAP1-205ENST00000541948 ATAT1Q5SQI0 421 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 IER5LQ5T953 404 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-205ENST00000541948 C15orf39Q6ZRI6 1047 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 ZNF720Q7Z2F6 126 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 MAP4K3Q8IVH8 894 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 KREMEN2Q8NCW0 462 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 DDX12PQ92771 950 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 BORCS6Q96GS4 357 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 TCHPQ9BT92 498 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 TTPALQ9BTX7 342 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 RPP25Q9BUL9 199 aaKnown RBP8.39□□□□□ -1.07
NECAP1-205ENST00000541948 CCDC94Q9BW85 323 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-205ENST00000541948 CRISPLD1Q9H336 500 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 ST6GALNAC4Q9H4F1 302 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 PARVGQ9HBI0 331 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 HCFC1R1Q9NWW0 138 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 TBC1D7Q9P0N9 293 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 LARSQ9P2J5 1176 aaKnown RBP8.39□□□□□ -1.07
NECAP1-205ENST00000541948 MTRRQ9UBK8 725 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 CPSF3Q9UKF6 684 aaKnown RBP8.39□□□□□ -1.07
NECAP1-205ENST00000541948 STYXL1Q9Y6J8 313 aa8.39□□□□□ -1.07
NECAP1-205ENST00000541948 CACNA1HO95180 2353 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 CLDN3O15551 220 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 NARSO43776 548 aaKnown RBP8.38□□□□□ -1.07
NECAP1-205ENST00000541948 FAM13AO94988 1023 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 SEC24AO95486 1093 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 F13A1P00488 732 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 NFICP08651 508 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 OR1D2P34982 312 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 AARSP49588 968 aaKnown RBP eCLIP8.38□□□□□ -1.07
NECAP1-205ENST00000541948 ACOT2P49753 483 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 ROR1Q01973 937 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 NHLH1Q02575 133 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 CREMQ03060 361 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 STRN3Q13033 797 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 MTMR3Q13615 1198 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 VARS2Q5ST30 1063 aaKnown RBP8.38□□□□□ -1.07
NECAP1-205ENST00000541948 EFCAB13Q8IY85 973 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 ZDHHC14Q8IZN3 488 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 PDILTQ8N807 584 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 KRI1Q8N9T8 703 aaKnown RBP8.38□□□□□ -1.07
NECAP1-205ENST00000541948 HDAC7Q8WUI4 952 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 NXPE3Q969Y0 559 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 ACSF2Q96CM8 615 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-205ENST00000541948 ZHX3Q9H4I2 956 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 WDR6Q9NNW5 1121 aaKnown RBP8.38□□□□□ -1.07
NECAP1-205ENST00000541948 STK17AQ9UEE5 414 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 SORCS3Q9UPU3 1222 aa8.38□□□□□ -1.07
NECAP1-205ENST00000541948 CDY1Q9Y6F8 540 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms