RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 JPH1Q9HDC5 661 aaPredicted RBP14.43□□□□□ -0.1
PTPN1-202ENST00000541713 XPNPEP1Q9NQW7 623 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 TJP2Q9UDY2 1190 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 LRRD1A4D1F6 860 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 PPFIA2O75334 1257 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 BRAFP15056 766 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 RAP1GAPP47736 663 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 GMPSP49915 693 aaPredicted RBP14.43□□□□□ -0.1
PTPN1-202ENST00000541713 ANGEL2Q5VTE6 544 aaKnown RBP14.43□□□□□ -0.1
PTPN1-202ENST00000541713 TDRD10Q5VZ19 366 aaKnown RBP14.43□□□□□ -0.1
PTPN1-202ENST00000541713 PCNX4Q63HM2 1172 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 ACAD10Q6JQN1 1059 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 CCDC197Q8NCU1 140 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 TMEM8AQ9HCN3 771 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 KAT6AQ92794 2004 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 TAF1LQ8IZX4 1826 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 BRCA2P51587 3418 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 MIF4GDA9UHW6 222 aaKnown RBP14.43□□□□□ -0.1
PTPN1-202ENST00000541713 F8VP50 259 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 CST3P01034 146 aaPredicted RBP14.43□□□□□ -0.1
PTPN1-202ENST00000541713 AUHQ13825 339 aaKnown RBP14.43□□□□□ -0.1
PTPN1-202ENST00000541713 FASTKD3Q14CZ7 662 aaKnown RBP14.43□□□□□ -0.1
PTPN1-202ENST00000541713 P3H1Q32P28 736 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 EMC1Q8N766 993 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 CEP120Q8N960 986 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 FLAD1Q8NFF5 587 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 NLRP4Q96MN2 994 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 SAYSD1Q9NPB0 183 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 GTF3C4Q9UKN8 822 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 EXOC3L1Q86VI1 746 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 NCAPG2Q86XI2 1143 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 C1orf131Q8NDD1 294 aaKnown RBP14.42□□□□□ -0.1
PTPN1-202ENST00000541713 ASAP3Q8TDY4 903 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 RUBCNQ92622 972 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 MCEEQ96PE7 176 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 WNT8AQ9H1J5 351 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 KLC4Q9NSK0 619 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 NHSQ6T4R5 1651 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 GRAP2O75791 330 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 KRT15P19012 456 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 DHX34Q14147 1143 aaKnown RBP14.42□□□□□ -0.1
PTPN1-202ENST00000541713 SLC9A2Q9UBY0 812 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 CNOT7Q9UIV1 285 aaKnown RBP14.42□□□□□ -0.1
PTPN1-202ENST00000541713 ZNF541Q9H0D2 1346 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 PGK2P07205 417 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 CETPP11597 493 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 DRD4P21917 467 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 STX2P32856 288 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 CDH8P55286 799 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 GAD2Q05329 585 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 IZUMO3Q5VZ72 239 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 MCOLN2Q8IZK6 566 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 MRIQ9BWK5 157 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 MTMR12Q9C0I1 747 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 APOBEC3GQ9HC16 384 aaKnown RBP14.42□□□□□ -0.1
PTPN1-202ENST00000541713 CYP26B1Q9NR63 512 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 NUB1Q9Y5A7 615 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 ATRNL1Q5VV63 1379 aa14.42□□□□□ -0.1
PTPN1-202ENST00000541713 RGS20O76081 388 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 GTF2H1P32780 548 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 SCTRP47872 440 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 SYNCQ9H7C4 482 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 PNMA3Q9UL41 463 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 PCDHA3Q9Y5H8 950 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 FAM187AA6NFU0 413 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 WDR46O15213 610 aaKnown RBP14.41□□□□□ -0.1
PTPN1-202ENST00000541713 KRT1P04264 644 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 EDN1P05305 212 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 CCND2P30279 289 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 BYSLQ13895 437 aaKnown RBP14.41□□□□□ -0.1
PTPN1-202ENST00000541713 MPP2Q14168 576 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 TMEM132BQ14DG7 1078 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 TMEM63BQ5T3F8 832 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 MROH7Q68CQ1 1323 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 RBBP8NLQ8NC74 664 aaPredicted RBP14.41□□□□□ -0.1
PTPN1-202ENST00000541713 PRCCQ92733 491 aaPredicted RBP14.41□□□□□ -0.1
PTPN1-202ENST00000541713 ATP6V0A1Q93050 837 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 GMLQ99445 158 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 TMEM121Q9BTD3 319 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 A1CFQ9NQ94 594 aaKnown RBP14.41□□□□□ -0.1
PTPN1-202ENST00000541713 L3MBTL1Q9Y468 752 aa14.41□□□□□ -0.1
PTPN1-202ENST00000541713 SGK1O00141 431 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 NEFHP12036 1026 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 GPS1Q13098 491 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 EMC2Q15006 297 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 CDO1Q16878 200 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 CLEC16AQ2KHT3 1053 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 B3GNT9Q6UX72 402 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 TAS1R3Q7RTX0 852 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 C4orf19Q8IY42 314 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 HAPLN2Q9GZV7 340 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 GAS8O95995 478 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 KRT76Q01546 638 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 GJC2Q5T442 439 aaPredicted RBP14.4□□□□□ -0.1
PTPN1-202ENST00000541713 STRA6Q9BX79 667 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 DNPEPQ9ULA0 475 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 CEP83Q9Y592 693 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 UBR3Q6ZT12 1888 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 A8MUI8 341 aa14.4□□□□□ -0.1
PTPN1-202ENST00000541713 INO80B-WBP1J3KQ70 363 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms