RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 VPS37AQ8NEZ2 397 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 PPM1EQ8WY54 764 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 FATE1Q969F0 183 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 RUNDC1Q96C34 613 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 TAAR9Q96RI9 348 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 NAP1L4Q99733 375 aaKnown RBP5.18□□□□□ -1.58
SNHG1-217ENST00000541578 LSM14BQ9BX40 385 aaKnown RBP5.18□□□□□ -1.58
SNHG1-217ENST00000541578 CPEB1Q9BZB8 566 aaKnown RBP5.18□□□□□ -1.58
SNHG1-217ENST00000541578 PPCSQ9HAB8 311 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 NLRC4Q9NPP4 1024 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 GPRC5DQ9NZD1 345 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 TAGLN3Q9UI15 199 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 GAPVD1Q14C86 1478 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 MAGI1Q96QZ7 1491 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-217ENST00000541578 TARBP1Q13395 1621 aaKnown RBP5.17□□□□□ -1.58
SNHG1-217ENST00000541578 GRXCR1A8MXD5 290 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 AKR1B10O60218 316 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 PHF2O75151 1096 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 ITGA10O75578 1167 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 ZRANB2O95218 330 aaKnown RBP eCLIP5.17□□□□□ -1.582e-9■■■■■ 30
SNHG1-217ENST00000541578 MYBP10242 640 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 C5AR1P21730 350 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 CRHR1P34998 444 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 PPM1FP49593 454 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-217ENST00000541578 AK2P54819 239 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 TGFB2P61812 414 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 MUM1Q2TAK8 710 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 MBNL2Q5VZF2 373 aaKnown RBP5.17□□□□□ -1.58
SNHG1-217ENST00000541578 ANO1Q5XXA6 986 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 XYLT1Q86Y38 959 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 FAM186BQ8IYM0 893 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 SPICE1Q8N0Z3 855 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 ZNF276Q8N554 614 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 MDM1Q8TC05 714 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 CPT1CQ8TCG5 803 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 PARD3BQ8TEW8 1205 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 SLC25A43Q8WUT9 341 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-217ENST00000541578 ZNF480Q8WV37 535 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 NEU4Q8WWR8 484 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-217ENST00000541578 RIN2Q8WYP3 895 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-217ENST00000541578 SLC2A13Q96QE2 648 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 STRBPQ96SI9 672 aaKnown RBP5.17□□□□□ -1.58
SNHG1-217ENST00000541578 ORAI2Q96SN7 254 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 MYD88Q99836 296 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 UBA5Q9GZZ9 404 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 NRDE2Q9H7Z3 1164 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 IFT122Q9HBG6 1241 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 EIF2B4Q9UI10 523 aaKnown RBP5.17□□□□□ -1.58
SNHG1-217ENST00000541578 SORCS3Q9UPU3 1222 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 TOP2AP11388 1531 aaKnown RBP5.17□□□□□ -1.58
SNHG1-217ENST00000541578 CLASP1Q7Z460 1538 aa5.17□□□□□ -1.58
SNHG1-217ENST00000541578 ZMYM3Q14202 1370 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 CCDC189A1A4V9 331 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 B5MCH6 92 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 FAM227AF5H4B4 570 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 PQBP1O60828 265 aaKnown RBP5.16□□□□□ -1.58
SNHG1-217ENST00000541578 RPS6KA4O75676 772 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 SCAF4O95104 1147 aaKnown RBP5.16□□□□□ -1.58
SNHG1-217ENST00000541578 POU2F2P09086 479 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 RHCEP18577 417 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 PTGS2P35354 604 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 FAM193AP78312 1265 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 CCT2P78371 535 aaKnown RBP5.16□□□□□ -1.58
SNHG1-217ENST00000541578 RHDQ02161 417 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 RAPGEF1Q13905 1077 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 LLGL1Q15334 1064 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 LONRF1Q17RB8 773 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 KIAA0753Q2KHM9 967 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 DARS2Q6PI48 645 aaKnown RBP5.16□□□□□ -1.58
SNHG1-217ENST00000541578 GPRIN1Q7Z2K8 1008 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 SRLQ86TD4 932 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 DENND1CQ8IV53 801 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 LILRA3Q8N6C8 439 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-217ENST00000541578 AMER2Q8N7J2 671 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 GPR156Q8NFN8 814 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 DIS3LQ8TF46 1054 aaKnown RBP5.16□□□□□ -1.58
SNHG1-217ENST00000541578 TSPEARQ8WU66 669 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 HAS1Q92839 578 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 HPS3Q969F9 1004 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 TRIM63Q969Q1 353 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 C1GALT1C1Q96EU7 318 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 MVB12AQ96EY5 273 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 ACO2Q99798 780 aaKnown RBP5.16□□□□□ -1.58
SNHG1-217ENST00000541578 NDC1Q9BTX1 674 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 ACE2Q9BYF1 805 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-217ENST00000541578 GTPBP4Q9BZE4 634 aaKnown RBP5.16□□□□□ -1.58
SNHG1-217ENST00000541578 KCNH6Q9H252 994 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 SPON1Q9HCB6 807 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 GPRC5BQ9NZH0 403 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 PHTF1Q9UMS5 762 aa5.16□□□□□ -1.58
SNHG1-217ENST00000541578 SYNJ2O15056 1496 aa5.15□□□□□ -1.58
SNHG1-217ENST00000541578 GRIN2BQ13224 1484 aa5.15□□□□□ -1.58
SNHG1-217ENST00000541578 TPP1O14773 563 aa5.15□□□□□ -1.59
SNHG1-217ENST00000541578 TRIM24O15164 1050 aa5.15□□□□□ -1.59
SNHG1-217ENST00000541578 MGEA5O60502 916 aa5.15□□□□□ -1.59
SNHG1-217ENST00000541578 RPLP2P05387 115 aaKnown RBP5.15□□□□□ -1.59
SNHG1-217ENST00000541578 PDCP20941 246 aa5.15□□□□□ -1.59
SNHG1-217ENST00000541578 ADSLP30566 484 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-217ENST00000541578 HTR3AP46098 478 aa5.15□□□□□ -1.59
SNHG1-217ENST00000541578 MTNR1BP49286 362 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms