RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ZNF507Q8TCN5 953 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 PPP1R13LQ8WUF5 828 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 WDR89Q96FK6 387 aaPredicted RBP6.12□□□□□ -1.43
DDB1-219ENST00000541513 CNDP2Q96KP4 475 aaKnown RBP6.12□□□□□ -1.43
DDB1-219ENST00000541513 ZNF830Q96NB3 372 aaPredicted RBP6.12□□□□□ -1.43
DDB1-219ENST00000541513 HEPHQ9BQS7 1158 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 WNT8AQ9H1J5 351 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 DEF6Q9H4E7 631 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 PRDM13Q9H4Q3 707 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 PCIF1Q9H4Z3 704 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 TMEM8AQ9HCN3 771 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 SAYSD1Q9NPB0 183 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 KRT84Q9NSB2 600 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 TRMT1Q9NXH9 659 aaKnown RBP6.12□□□□□ -1.43
DDB1-219ENST00000541513 POLKQ9UBT6 870 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 FEM1BQ9UK73 627 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 OGDHLQ9ULD0 1010 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 SNX8Q9Y5X2 465 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 ATP23Q9Y6H3 246 aa6.12□□□□□ -1.43
DDB1-219ENST00000541513 RGPD1P0DJD0 1748 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 FLT1P17948 1338 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 WDR17Q8IZU2 1322 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 CCDC154A6NI56 674 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 FAM177BA6PVY3 158 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 PLOD2O00469 737 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 SLC7A4O43246 635 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 TSPAN3O60637 253 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 COBLO75128 1261 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 TBCAO75347 108 aaKnown RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 B3GALNT1O75752 331 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 CST3P01034 146 aaPredicted RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 MT-ND3P03897 115 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 A1BGP04217 495 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 CYP17A1P05093 508 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 ZSCAN22P10073 491 aaPredicted RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 MAPTP10636 758 aaKnown RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 SMPD1P17405 629 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 EPHA1P21709 976 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 FGFR2P21802 821 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 FBLN1P23142 703 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 MAOBP27338 520 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 HOXC9P31274 260 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 ABCD1P33897 745 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 GMPRP36959 345 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 PHKA1P46020 1223 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 AMPHP49418 695 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 MAP2K6P52564 334 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 HSD17B7P56937 341 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 UBXN2AP68543 259 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 MRPS35P82673 323 aaKnown RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 HTRA4P83105 476 aaPredicted RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 TAF7Q15545 349 aaPredicted RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 TSTQ16762 297 aaKnown RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 UGT8Q16880 541 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 PAN2Q504Q3 1202 aaKnown RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 KLHDC7AQ5VTJ3 777 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 TMTC3Q6ZXV5 915 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 CCDC103Q8IW40 242 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 SIRT2Q8IXJ6 389 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 CCAR2Q8N163 923 aaKnown RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 LINC00528Q8N1L1 170 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 ATP11CQ8NB49 1132 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 AVL9Q8NBF6 648 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 OTUD7AQ8TE49 926 aaPredicted RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 FNIP1Q8TF40 1166 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 AUTS2Q8WXX7 1259 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 ST8SIA4Q92187 359 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 WNT8BQ93098 351 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 ZUFSPQ96AP4 578 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 PAIP1Q9H074 479 aaKnown RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 OR10A4Q9H209 315 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 GRPEL1Q9HAV7 217 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 SMURF1Q9HCE7 757 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 ACSS2Q9NR19 701 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 SH2B1Q9NRF2 756 aaPredicted RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 BTG4Q9NY30 223 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 TMOD4Q9NZQ9 345 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 TMEFF2Q9UIK5 374 aaPredicted RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 USP21Q9UK80 565 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 PRDM4Q9UKN5 801 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 HCN2Q9UL51 889 aa6.11□□□□□ -1.43
DDB1-219ENST00000541513 CFAP20Q9Y6A4 193 aaKnown RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 PARP4Q9UKK3 1724 aaKnown RBP6.11□□□□□ -1.43
DDB1-219ENST00000541513 GLI3P10071 1580 aa6.1□□□□□ -1.43
DDB1-219ENST00000541513 COL3A1P02461 1466 aaPredicted RBP6.1□□□□□ -1.43
DDB1-219ENST00000541513 CRB1P82279 1406 aa6.1□□□□□ -1.43
DDB1-219ENST00000541513 NCAPD2Q15021 1401 aa6.1□□□□□ -1.43
DDB1-219ENST00000541513 DCDC2BA2VCK2 349 aa6.1□□□□□ -1.43
DDB1-219ENST00000541513 KRT37O76014 449 aa6.1□□□□□ -1.43
DDB1-219ENST00000541513 GOSR1O95249 250 aa6.1□□□□□ -1.43
DDB1-219ENST00000541513 TGDSO95455 350 aa6.1□□□□□ -1.43
DDB1-219ENST00000541513 MLYCDO95822 493 aa6.1□□□□□ -1.43
DDB1-219ENST00000541513 PLATP00750 562 aa6.1□□□□□ -1.43
DDB1-219ENST00000541513 THEGLP0DJG4 465 aa6.1□□□□□ -1.43
DDB1-219ENST00000541513 CST5P28325 142 aaPredicted RBP6.1□□□□□ -1.43
DDB1-219ENST00000541513 GRK3P35626 688 aa6.1□□□□□ -1.43
DDB1-219ENST00000541513 HNF4AP41235 474 aa6.1□□□□□ -1.43
DDB1-219ENST00000541513 TNNT2P45379 298 aaPredicted RBP6.1□□□□□ -1.43
DDB1-219ENST00000541513 GSK3AP49840 483 aa6.1□□□□□ -1.43
DDB1-219ENST00000541513 BCAR1P56945 870 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms