RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 BAATQ14032 418 aaPredicted RBP11.14□□□□□ -0.63
CHFR-219ENST00000541341 NFIL3Q16649 462 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 ZCWPW2Q504Y3 356 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 FAM47CQ5HY64 1035 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 SPDYAQ5MJ70 313 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 RASIP1Q5U651 963 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 ALKBH5Q6P6C2 394 aaKnown RBP11.14□□□□□ -0.63
CHFR-219ENST00000541341 MOXD1Q6UVY6 613 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 SYDE1Q6ZW31 735 aaPredicted RBP11.14□□□□□ -0.63
CHFR-219ENST00000541341 TRMT10CQ7L0Y3 403 aaKnown RBP11.14□□□□□ -0.63
CHFR-219ENST00000541341 CYFIP1Q7L576 1253 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 PIGWQ7Z7B1 504 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 KLHL7Q8IXQ5 586 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 SNX29Q8TEQ0 813 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 ATXN2LQ8WWM7 1075 aaKnown RBP11.14□□□□□ -0.63
CHFR-219ENST00000541341 SCLT1Q96NL6 688 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 NECAB3Q96P71 396 aaPredicted RBP11.14□□□□□ -0.63
CHFR-219ENST00000541341 CCDC77Q9BR77 488 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 TMEM60Q9H2L4 133 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 PPCSQ9HAB8 311 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 SLC28A3Q9HAS3 691 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 INTS9Q9NV88 658 aaKnown RBP11.14□□□□□ -0.63
CHFR-219ENST00000541341 BCCIPQ9P287 314 aaKnown RBP eCLIP11.14□□□□□ -0.638e-6■□□□□ 10.5
CHFR-219ENST00000541341 ARMCX3Q9UH62 379 aaPredicted RBP11.14□□□□□ -0.63
CHFR-219ENST00000541341 NAGPAQ9UK23 515 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 SLC12A4Q9UP95 1085 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 TRAF3IP3Q9Y228 551 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 PCDHA1Q9Y5I3 950 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 UBE4BO95155 1302 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 hCG_1642624A0A1W2PR95 340 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 MYMKA6NI61 221 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 TNFRSF10AO00220 468 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 WNT7AO00755 349 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 OPLAHO14841 1288 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 TBX3O15119 743 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 FAM153BP0C7A2 387 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 GAP43P17677 238 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 DRD4P21917 467 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 CCNG1P51959 295 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 SEC24CP53992 1094 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 PMS2P54278 862 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 MAGOHP61326 146 aaKnown RBP11.13□□□□□ -0.63
CHFR-219ENST00000541341 DR1Q01658 176 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 CCDC15Q0P6D6 951 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 ADAM9Q13443 819 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 PPP1R7Q15435 360 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 EXOC3L4Q17RC7 722 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 FAM153CQ494X1 144 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 CMPK2Q5EBM0 449 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 PPP2R2DQ66LE6 453 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 SLC30A10Q6XR72 485 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 TRPM8Q7Z2W7 1104 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 LRRC57Q8N9N7 239 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 BBOF1Q8ND07 529 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 TPCN2Q8NHX9 752 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 CLEC4DQ8WXI8 215 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 CTNNBL1Q8WYA6 563 aaPredicted RBP11.13□□□□□ -0.63
CHFR-219ENST00000541341 RFFLQ8WZ73 363 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 HERVK_113Q902F9 699 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 COPS5Q92905 334 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 MAGOHBQ96A72 148 aaKnown RBP11.13□□□□□ -0.63
CHFR-219ENST00000541341 HES6Q96HZ4 224 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 ERP44Q9BS26 406 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 MKNK1Q9BUB5 465 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 TUBB6Q9BUF5 446 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 FOXP3Q9BZS1 431 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 NOD2Q9HC29 1040 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 SPATS2LQ9NUQ6 558 aaKnown RBP11.13□□□□□ -0.63
CHFR-219ENST00000541341 TYW1Q9NV66 732 aaKnown RBP11.13□□□□□ -0.63
CHFR-219ENST00000541341 MAP3K20Q9NYL2 800 aaKnown RBP11.13□□□□□ -0.63
CHFR-219ENST00000541341 THEGQ9P2T0 379 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 FAM153AQ9UHL3 310 aa11.13□□□□□ -0.63
CHFR-219ENST00000541341 MRPL11Q9Y3B7 192 aaKnown RBP11.13□□□□□ -0.63
CHFR-219ENST00000541341 NCANO14594 1321 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 PIK3CDO00329 1044 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 NCK2O43639 380 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 FTCDO95954 541 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 KRT18P05783 430 aaKnown RBP11.12□□□□□ -0.63
CHFR-219ENST00000541341 MMEP08473 750 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 ALADP13716 330 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 COL9A1P20849 921 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 TXKP42681 527 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 KLK7P49862 253 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 ALDH5A1P51649 535 aaPredicted RBP11.12□□□□□ -0.63
CHFR-219ENST00000541341 ELF3P78545 371 aaPredicted RBP11.12□□□□□ -0.63
CHFR-219ENST00000541341 TFF2Q03403 129 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 KCNMA1Q12791 1236 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 CETN1Q12798 172 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 COASYQ13057 564 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 GRB10Q13322 594 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 TTLL4Q14679 1199 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 SKIV2LQ15477 1246 aaKnown RBP11.12□□□□□ -0.63
CHFR-219ENST00000541341 RAB30Q15771 203 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 TTC19Q6DKK2 380 aaPredicted RBP11.12□□□□□ -0.63
CHFR-219ENST00000541341 SLC43A3Q8NBI5 491 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 OR6J1Q8NGC5 347 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 ADAMTS19Q8TE59 1207 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 TBCKQ8TEA7 893 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 FBF1Q8TES7 1133 aa11.12□□□□□ -0.63
CHFR-219ENST00000541341 GPKOWQ92917 476 aaPredicted RBP eCLIP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms