RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 GCSHP23434 173 aa7.93□□□□□ -1.14
YBX3-210ENST00000540975 LY6G5CQ5SRR4 150 aa7.93□□□□□ -1.14
YBX3-210ENST00000540975 TTC7BQ86TV6 843 aa7.93□□□□□ -1.14
YBX3-210ENST00000540975 PRR18Q8N4B5 295 aa7.93□□□□□ -1.14
YBX3-210ENST00000540975 IL17RDQ8NFM7 739 aa7.93□□□□□ -1.14
YBX3-210ENST00000540975 NSUN6Q8TEA1 469 aaKnown RBP7.93□□□□□ -1.14
YBX3-210ENST00000540975 HOOK2Q96ED9 719 aa7.93□□□□□ -1.14
YBX3-210ENST00000540975 HSPBAP1Q96EW2 488 aa7.93□□□□□ -1.14
YBX3-210ENST00000540975 CEP89Q96ST8 783 aa7.93□□□□□ -1.14
YBX3-210ENST00000540975 MAP3K2Q9Y2U5 619 aa7.93□□□□□ -1.14
YBX3-210ENST00000540975 A0A1B0GTW7 788 aa7.92□□□□□ -1.14
YBX3-210ENST00000540975 LPXNO60711 386 aa7.92□□□□□ -1.14
YBX3-210ENST00000540975 HLA-DOAP06340 250 aa7.92□□□□□ -1.14
YBX3-210ENST00000540975 ELANEP08246 267 aa7.92□□□□□ -1.14
YBX3-210ENST00000540975 POU2F2P09086 479 aa7.92□□□□□ -1.14
YBX3-210ENST00000540975 SBK3P0C264 359 aa7.92□□□□□ -1.14
YBX3-210ENST00000540975 TLE1Q04724 770 aa7.92□□□□□ -1.14
YBX3-210ENST00000540975 PTPAQ15257 358 aa7.92□□□□□ -1.14
YBX3-210ENST00000540975 TTF1Q15361 905 aaPredicted RBP7.92□□□□□ -1.14
YBX3-210ENST00000540975 PABPC1LQ4VXU2 614 aaKnown RBP7.92□□□□□ -1.14
YBX3-210ENST00000540975 KCNV1Q6PIU1 500 aa7.92□□□□□ -1.14
YBX3-210ENST00000540975 Q6ZPA2 131 aa7.92□□□□□ -1.14
YBX3-210ENST00000540975 MAPKAPK5Q8IW41 473 aa7.92□□□□□ -1.14
YBX3-210ENST00000540975 MRIQ9BWK5 157 aa7.92□□□□□ -1.14
YBX3-210ENST00000540975 IP6K2Q9UHH9 426 aa7.92□□□□□ -1.14
YBX3-210ENST00000540975 CCDC78A2IDD5 438 aa7.91□□□□□ -1.14
YBX3-210ENST00000540975 GRM6O15303 877 aa7.91□□□□□ -1.14
YBX3-210ENST00000540975 IL33O95760 270 aa7.91□□□□□ -1.14
YBX3-210ENST00000540975 CFIP05156 583 aa7.91□□□□□ -1.14
YBX3-210ENST00000540975 MTHFD1P11586 935 aaKnown RBP7.91□□□□□ -1.14
YBX3-210ENST00000540975 SLC6A4P31645 630 aa7.91□□□□□ -1.14
YBX3-210ENST00000540975 RESTQ13127 1097 aa7.91□□□□□ -1.14
YBX3-210ENST00000540975 KHDC1Q4VXA5 237 aaKnown RBP7.91□□□□□ -1.14
YBX3-210ENST00000540975 GADL1Q6ZQY3 521 aa7.91□□□□□ -1.14
YBX3-210ENST00000540975 ARHGEF19Q8IW93 802 aa7.91□□□□□ -1.14
YBX3-210ENST00000540975 TMEM132CQ8N3T6 1108 aa7.91□□□□□ -1.14
YBX3-210ENST00000540975 CPEB3Q8NE35 698 aaKnown RBP7.91□□□□□ -1.14
YBX3-210ENST00000540975 MARS2Q96GW9 593 aaKnown RBP7.91□□□□□ -1.14
YBX3-210ENST00000540975 VRK1Q99986 396 aaPredicted RBP7.91□□□□□ -1.14
YBX3-210ENST00000540975 COL4A3Q01955 1670 aa7.91□□□□□ -1.14
YBX3-210ENST00000540975 MARCH11A6NNE9 402 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 KRT4P19013 534 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 NOMO3P69849 1222 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 DPTQ07507 201 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 MCL1Q07820 350 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 NOMO2Q5JPE7 1267 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 USP45Q70EL2 814 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 VRK3Q8IV63 474 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 TBC1D15Q8TC07 691 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 NUP133Q8WUM0 1156 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 ADAM2Q99965 735 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 ZSWIM1Q9BR11 485 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 RNPEPQ9H4A4 650 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 ANKFY1Q9P2R3 1169 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 ANKRD6Q9Y2G4 727 aa7.9□□□□□ -1.14
YBX3-210ENST00000540975 AATKQ6ZMQ8 1374 aa7.89□□□□□ -1.15
YBX3-210ENST00000540975 CDHR4A6H8M9 788 aa7.89□□□□□ -1.15
YBX3-210ENST00000540975 ABLIM3O94929 683 aa7.89□□□□□ -1.15
YBX3-210ENST00000540975 FGFR4P22455 802 aa7.89□□□□□ -1.15
YBX3-210ENST00000540975 AKAP5P24588 427 aa7.89□□□□□ -1.15
YBX3-210ENST00000540975 DDX6P26196 483 aaKnown RBP eCLIP7.89□□□□□ -1.15
YBX3-210ENST00000540975 TGFB2P61812 414 aa7.89□□□□□ -1.15
YBX3-210ENST00000540975 OCA2Q04671 838 aa7.89□□□□□ -1.15
YBX3-210ENST00000540975 SNAPC2Q13487 334 aa7.89□□□□□ -1.15
YBX3-210ENST00000540975 B3GNTL1Q67FW5 361 aaPredicted RBP7.89□□□□□ -1.15
YBX3-210ENST00000540975 PRRX2Q99811 253 aa7.89□□□□□ -1.15
YBX3-210ENST00000540975 KRTAP4-5Q9BYR2 181 aa7.89□□□□□ -1.15
YBX3-210ENST00000540975 SERHL2Q9H4I8 314 aa7.89□□□□□ -1.15
YBX3-210ENST00000540975 MAN1C1Q9NR34 630 aa7.89□□□□□ -1.15
YBX3-210ENST00000540975 SLC43A1O75387 559 aa7.88□□□□□ -1.15
YBX3-210ENST00000540975 VCAM1P19320 739 aa7.88□□□□□ -1.15
YBX3-210ENST00000540975 MALP21145 153 aa7.88□□□□□ -1.15
YBX3-210ENST00000540975 HMGA2P52926 109 aa7.88□□□□□ -1.15
YBX3-210ENST00000540975 GUCY1B3Q02153 619 aa7.88□□□□□ -1.15
YBX3-210ENST00000540975 UTP14CQ5TAP6 766 aaKnown RBP7.88□□□□□ -1.15
YBX3-210ENST00000540975 LAIR1Q6GTX8 287 aa7.88□□□□□ -1.15
YBX3-210ENST00000540975 LDLRAD3Q86YD5 345 aa7.88□□□□□ -1.15
YBX3-210ENST00000540975 TMEM191CA6NGB0 347 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 UNC119BA6NIH7 251 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 HAUS5O94927 633 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 GPANK1O95872 356 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 RAB27AP51159 221 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 HSD11B2P80365 405 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 SPDYE7PQ495Y7 208 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 FLYWCH1Q4VC44 716 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 ARMC6Q6NXE6 501 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 CATIPQ7Z7H3 387 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 FAM43AQ8N2R8 423 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 C3orf20Q8ND61 904 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 BOD1Q96IK1 185 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 PNKPQ96T60 521 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 NUP88Q99567 741 aaPredicted RBP7.87□□□□□ -1.15
YBX3-210ENST00000540975 WDR11Q9BZH6 1224 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 JKAMPQ9P055 326 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 USP25Q9UHP3 1055 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 POLHQ9Y253 713 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 NOX1Q9Y5S8 564 aa7.87□□□□□ -1.15
YBX3-210ENST00000540975 LRRC14BA6NHZ5 514 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 F2RL2O00254 374 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 FOXN1O15353 648 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms