RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 CLLU1OSQ5K130 101 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 IFIT1BQ5T764 474 aaKnown RBP5.24□□□□□ -1.57
SNHG1-214ENST00000540865 DDX53Q86TM3 631 aaKnown RBP5.24□□□□□ -1.57
SNHG1-214ENST00000540865 FAM228AQ86W67 206 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 ECHDC2Q86YB7 292 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 HOMER1Q86YM7 354 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 WFDC8Q8IUA0 241 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 VPS52Q8N1B4 723 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 TMEM102Q8N9M5 508 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-214ENST00000540865 FEZF2Q8TBJ5 459 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 TRAPPC12Q8WVT3 735 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 AUTS2Q8WXX7 1259 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 DDX1Q92499 740 aaKnown RBP5.24□□□□□ -1.57
SNHG1-214ENST00000540865 TTC9Q92623 222 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 CUL5Q93034 780 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 FAM227BQ96M60 508 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 PIGSQ96S52 555 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 UBAC1Q9BSL1 405 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 EMILIN2Q9BXX0 1053 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 MRPL9Q9BYD2 267 aaKnown RBP5.24□□□□□ -1.57
SNHG1-214ENST00000540865 BCO2Q9BYV7 579 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 OSBPL6Q9BZF3 934 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 WDR6Q9NNW5 1121 aaKnown RBP5.24□□□□□ -1.57
SNHG1-214ENST00000540865 PARD6AQ9NPB6 346 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 SPATA6Q9NWH7 488 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-214ENST00000540865 ZSWIM5Q9P217 1185 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 DPP7Q9UHL4 492 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 GMEB2Q9UKD1 530 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 GINS2Q9Y248 185 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 UBIAD1Q9Y5Z9 338 aa5.24□□□□□ -1.57
SNHG1-214ENST00000540865 A0A0D9SFI3 127 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 A0A0U1RQF3 1178 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 KANSL1LA0AUZ9 987 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 B4E1Z4 1266 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 NT5C1B-RDH14C9J2C7 533 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 ANHXE9PGG2 379 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 LINC01387J3KSC0 135 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 MEIS2O14770 477 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 HBP1O60381 514 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 FOXD2O60548 495 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-214ENST00000540865 GPR32O75388 356 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 PAPLNO95428 1278 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 PROS1P07225 676 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 MX1P20591 662 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 KLRC2P26717 231 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 PMLP29590 882 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 METAP2P50579 478 aaKnown RBP eCLIP5.23□□□□□ -1.57
SNHG1-214ENST00000540865 CLCN4P51793 760 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 PRKCQQ04759 706 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 MTMR1Q13613 665 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 GRM4Q14833 912 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 KIZQ2M2Z5 673 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 ZNF484Q5JVG2 852 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 RSPO2Q6UXX9 243 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-214ENST00000540865 ZNF589Q86UQ0 364 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-214ENST00000540865 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 CCNJLQ8IV13 435 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 GLIS3Q8NEA6 775 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 SMARCC2Q8TAQ2 1214 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 OTUD7AQ8TE49 926 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-214ENST00000540865 FOXD4L4Q8WXT5 416 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-214ENST00000540865 IGSF21Q96ID5 467 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 KLHL5Q96PQ7 755 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 MYADMQ96S97 322 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 DUSP9Q99956 384 aaKnown RBP5.23□□□□□ -1.57
SNHG1-214ENST00000540865 DDX23Q9BUQ8 820 aaKnown RBP5.23□□□□□ -1.57
SNHG1-214ENST00000540865 FAM126AQ9BYI3 521 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-214ENST00000540865 FOXQ1Q9C009 403 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 KRT23Q9C075 422 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 MUC3BQ9H195 1237 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 CNNM2Q9H8M5 875 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 JADE2Q9NQC1 790 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.23□□□□□ -1.57
SNHG1-214ENST00000540865 SLC9A2Q9UBY0 812 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 COL1A2P08123 1366 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 CACNA1IQ9P0X4 2223 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 CLUHO75153 1309 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 NFASCO94856 1347 aa5.23□□□□□ -1.57
SNHG1-214ENST00000540865 PLXNA4Q9HCM2 1894 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 IGKV6D-21A0A0A0MT36 114 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 CCDC195A0A1B0GUA6 201 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 FAM170BA6NMN3 283 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 CYTH3O43739 400 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 LRRN2O75325 713 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 C1RP00736 705 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 GALTP07902 379 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 RETP07949 1114 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 CNPP09543 421 aaKnown RBP5.22□□□□□ -1.57
SNHG1-214ENST00000540865 LAMP2P13473 410 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 CDC27P30260 824 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 GATA4P43694 442 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 ACTR2P61160 394 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 NMIQ13287 307 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-214ENST00000540865 HTR4Q13639 388 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 WTAPQ15007 396 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 SEC23AQ15436 765 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 HGSNATQ68CP4 663 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 ALG1LQ6GMV1 187 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 LAIR1Q6GTX8 287 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 USP17L6PQ6QN14 398 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms