RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 WNT7BP56706 349 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 ARID5AQ03989 594 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 GFPT1Q06210 699 aaPredicted RBP13.46□□□□□ -0.25
SMAD3-204ENST00000540846 DSC3Q14574 896 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 ZNF568Q3ZCX4 644 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 CEP120Q8N960 986 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 NAPGQ99747 312 aaPredicted RBP13.46□□□□□ -0.25
SMAD3-204ENST00000540846 TMEM117Q9H0C3 514 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 LUC7LQ9NQ29 371 aaKnown RBP13.46□□□□□ -0.25
SMAD3-204ENST00000540846 DNAJC12Q9UKB3 198 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 AGO2Q9UKV8 859 aaKnown RBP13.46□□□□□ -0.25
SMAD3-204ENST00000540846 TFR2Q9UP52 801 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 COQ4Q9Y3A0 265 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 TRIM43BA6NCK2 446 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 KIAA0355O15063 1070 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 OGTO15294 1046 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 MGEA5O60502 916 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 MCF2P10911 925 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 MAGEA1P43355 309 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 PTK2Q05397 1052 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 TUBB2AQ13885 445 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 SEZ6Q53EL9 994 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 NOTUMQ6P988 496 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 SLC27A1Q6PCB7 646 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 ZBTB33Q86T24 672 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 TMEM192Q8IY95 271 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 TRIM43Q96BQ3 446 aaPredicted RBP13.45□□□□□ -0.26
SMAD3-204ENST00000540846 MSTO1Q9BUK6 570 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 TUBB2BQ9BVA1 445 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 EIF2AQ9BY44 585 aaKnown RBP13.45□□□□□ -0.26
SMAD3-204ENST00000540846 GPR88Q9GZN0 384 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 TMEM8AQ9HCN3 771 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 PIN4Q9Y237 131 aaKnown RBP13.45□□□□□ -0.26
SMAD3-204ENST00000540846 A0A087X0T9 212 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 ZNF233A6NK53 670 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 GPR182O15218 404 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 GFPT2O94808 682 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 CXCL10P02778 98 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 FAM228BP0C875 321 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 CYP2C18P33260 490 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 TNFSF9P41273 254 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 ACOT2P49753 483 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 CLDN10P78369 228 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 NCBP1Q09161 790 aaKnown RBP13.45□□□□□ -0.26
SMAD3-204ENST00000540846 PAK2Q13177 524 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 DRAP1Q14919 205 aaPredicted RBP13.45□□□□□ -0.26
SMAD3-204ENST00000540846 PSMD6Q15008 389 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 TCTN1Q2MV58 587 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 PLEKHG4Q58EX7 1191 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 KRT39Q6A163 491 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 PHLDB3Q6NSJ2 640 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 ZNF571Q7Z3V5 609 aaPredicted RBP13.45□□□□□ -0.26
SMAD3-204ENST00000540846 LINC01599Q8WXQ3 324 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 TSC1Q92574 1164 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 SECISBP2LQ93073 1101 aaKnown RBP13.45□□□□□ -0.26
SMAD3-204ENST00000540846 CCDC127Q96BQ5 260 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 FAM213AQ9BRX8 229 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 TRAIPQ9BWF2 469 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 PPP1R12CQ9BZL4 782 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 CPSF3Q9UKF6 684 aaKnown RBP13.45□□□□□ -0.26
SMAD3-204ENST00000540846 NENFQ9UMX5 172 aa13.45□□□□□ -0.26
SMAD3-204ENST00000540846 EVI5O60447 810 aa13.44□□□□□ -0.26
SMAD3-204ENST00000540846 AMPD2Q01433 879 aa13.44□□□□□ -0.26
SMAD3-204ENST00000540846 NFX1Q12986 1120 aaKnown RBP13.44□□□□□ -0.26
SMAD3-204ENST00000540846 C10orf76Q5T2E6 689 aa13.44□□□□□ -0.26
SMAD3-204ENST00000540846 ARHGEF19Q8IW93 802 aa13.44□□□□□ -0.26
SMAD3-204ENST00000540846 SCLYQ96I15 445 aa13.44□□□□□ -0.26
SMAD3-204ENST00000540846 SYT11Q9BT88 431 aa13.44□□□□□ -0.26
SMAD3-204ENST00000540846 TCHPQ9BT92 498 aa13.44□□□□□ -0.26
SMAD3-204ENST00000540846 CHST12Q9NRB3 414 aa13.44□□□□□ -0.26
SMAD3-204ENST00000540846 TMEM39AQ9NV64 488 aa13.44□□□□□ -0.26
SMAD3-204ENST00000540846 PCDH10Q9P2E7 1040 aa13.44□□□□□ -0.26
SMAD3-204ENST00000540846 DUSP10Q9Y6W6 482 aa13.44□□□□□ -0.26
SMAD3-204ENST00000540846 PTPRSQ13332 1948 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 MYH10P35580 1976 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 ANO9A1A5B4 782 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 MACROD2A1Z1Q3 448 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 NPTXRO95502 500 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 LDHAP00338 332 aaKnown RBP13.43□□□□□ -0.26
SMAD3-204ENST00000540846 CCDC172P0C7W6 258 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 PNMA6AP0CW24 399 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-204ENST00000540846 HARSP12081 509 aaKnown RBP13.43□□□□□ -0.26
SMAD3-204ENST00000540846 GRM5P41594 1212 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 CCL23P55773 120 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 ENOX2Q16206 610 aaKnown RBP13.43□□□□□ -0.26
SMAD3-204ENST00000540846 DCAF4L1Q3SXM0 396 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 C15orf39Q6ZRI6 1047 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 RTN4RL1Q86UN2 441 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-204ENST00000540846 VPS36Q86VN1 386 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 BRSK2Q8IWQ3 736 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 SMG8Q8ND04 991 aaKnown RBP13.43□□□□□ -0.26
SMAD3-204ENST00000540846 LRRN4CLQ8ND94 238 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 TRIM58Q8NG06 486 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 OLIG1Q8TAK6 271 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 NXF3Q9H4D5 531 aaKnown RBP13.43□□□□□ -0.26
SMAD3-204ENST00000540846 TOPORSQ9NS56 1045 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-204ENST00000540846 ADAMTS1Q9UHI8 967 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 CDC23Q9UJX2 597 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 TTC3P53804 2025 aa13.43□□□□□ -0.26
SMAD3-204ENST00000540846 BTNL10A8MVZ5 291 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms