RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 ZNF720Q7Z2F6 126 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 PAAF1Q9BRP4 392 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 TBC1D17Q9HA65 648 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 PARD6AQ9NPB6 346 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 DLGAP2Q9P1A6 1054 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 PARP2Q9UGN5 583 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 KCNH3Q9ULD8 1083 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 TBX20Q9UMR3 447 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 GDAQ9Y2T3 454 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 RBM19Q9Y4C8 960 aaKnown RBP12.49□□□□□ -0.41
TMEM258-205ENST00000540434 K7ENM7 598 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 HOXA2O43364 376 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 KINO60870 393 aaKnown RBP12.48□□□□□ -0.41
TMEM258-205ENST00000540434 RECQL4O94761 1208 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 SKIP12755 728 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 EPCAMP16422 314 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 KCNA4P22459 653 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 RFX1P22670 979 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 TGM1P22735 817 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 AFMP43652 599 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 NUCB2P80303 420 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 NCBP1Q09161 790 aaKnown RBP12.48□□□□□ -0.41
TMEM258-205ENST00000540434 SMC1AQ14683 1233 aaKnown RBP12.48□□□□□ -0.41
TMEM258-205ENST00000540434 TAS1R1Q7RTX1 841 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 C1orf210Q8IVY1 113 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 COLGALT2Q8IYK4 626 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 ABI1Q8IZP0 508 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 SLC39A11Q8N1S5 342 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 LRRC43Q8N309 656 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 IQUBQ8NA54 791 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 SLC22A17Q8WUG5 538 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 KCNN1Q92952 543 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 PGBD4Q96DM1 585 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 PAGE5Q96GU1 130 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 ZMAT2Q96NC0 199 aaKnown RBP12.48□□□□□ -0.41
TMEM258-205ENST00000540434 RTKNQ9BST9 563 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 MRPL4Q9BYD3 311 aaKnown RBP12.48□□□□□ -0.41
TMEM258-205ENST00000540434 TRIM9Q9C026 710 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 PANK4Q9NVE7 773 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 RNF216Q9NWF9 866 aaPredicted RBP12.48□□□□□ -0.41
TMEM258-205ENST00000540434 SPG21Q9NZD8 308 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 LARSQ9P2J5 1176 aaKnown RBP12.48□□□□□ -0.41
TMEM258-205ENST00000540434 USP18Q9UMW8 372 aa12.48□□□□□ -0.41
TMEM258-205ENST00000540434 ZFYVE26Q68DK2 2539 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 KLRC4O43908 158 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 FAM189A1O60320 539 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 ZC3H11AO75152 810 aaKnown RBP eCLIP12.47□□□□□ -0.41
TMEM258-205ENST00000540434 GADD45BO75293 160 aaPredicted RBP12.47□□□□□ -0.41
TMEM258-205ENST00000540434 TBCAO75347 108 aaKnown RBP12.47□□□□□ -0.41
TMEM258-205ENST00000540434 PRR29P0C7W0 189 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 HARSP12081 509 aaKnown RBP12.47□□□□□ -0.41
TMEM258-205ENST00000540434 IDEP14735 1019 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 TNFSF9P41273 254 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 SMTNP53814 917 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 KRT17Q04695 432 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 DSC1Q08554 894 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 TMEM132AQ24JP5 1023 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 ALKAL1Q6UXT8 129 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 TMC5Q6UXY8 1006 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 FSIP1Q8NA03 581 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 CNNM3Q8NE01 707 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 ST13P5Q8NFI4 369 aaPredicted RBP12.47□□□□□ -0.41
TMEM258-205ENST00000540434 AUTS2Q8WXX7 1259 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 ZNF558Q96NG5 402 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 C7orf25Q9BPX7 421 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 TRIM6Q9C030 488 aaPredicted RBP12.47□□□□□ -0.41
TMEM258-205ENST00000540434 SCAND2PQ9GZW5 306 aaPredicted RBP12.47□□□□□ -0.41
TMEM258-205ENST00000540434 MARCH5Q9NX47 278 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 FAM13BQ9NYF5 915 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 GIT1Q9Y2X7 761 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 COL4A3Q01955 1670 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 SPEGQ15772 3267 aa12.47□□□□□ -0.41
TMEM258-205ENST00000540434 NRP1O14786 923 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 PRPF6O94906 941 aaKnown RBP12.46□□□□□ -0.41
TMEM258-205ENST00000540434 CXCL14O95715 111 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 EFEMP2O95967 443 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 PIGRP01833 764 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 SDHBP21912 280 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 ADSSP30520 456 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 PPM1AP35813 382 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 SOX4Q06945 474 aaPredicted RBP12.46□□□□□ -0.41
TMEM258-205ENST00000540434 EHHADHQ08426 723 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 SLC10A6Q3KNW5 377 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 ZNF568Q3ZCX4 644 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 GLRA4Q5JXX5 417 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 SCARA3Q6AZY7 606 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 MPZL3Q6UWV2 235 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 CD300LGQ6UXG3 332 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 MAP4K3Q8IVH8 894 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 FOXQ1Q9C009 403 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 TNMDQ9H2S6 317 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 ST6GALNAC4Q9H4F1 302 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 ANKFY1Q9P2R3 1169 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 WNT16Q9UBV4 365 aa12.46□□□□□ -0.41
TMEM258-205ENST00000540434 SETXQ7Z333 2677 aaKnown RBP12.46□□□□□ -0.41
TMEM258-205ENST00000540434 A0A1W2PQ27 194 aa12.45□□□□□ -0.42
TMEM258-205ENST00000540434 A0A1W2PQ64 194 aa12.45□□□□□ -0.42
TMEM258-205ENST00000540434 A0A1W2PQD8 194 aa12.45□□□□□ -0.42
TMEM258-205ENST00000540434 PRR5-ARHGAP8B1AHC4 643 aa12.45□□□□□ -0.42
TMEM258-205ENST00000540434 N4BP1O75113 896 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms