RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 LTB4R2Q9NPC1 389 aa13.16□□□□□ -0.3
CBX3P4-202ENST00000540428 KMT5AQ9NQR1 393 aa13.16□□□□□ -0.3
CBX3P4-202ENST00000540428 CNTN3Q9P232 1028 aa13.16□□□□□ -0.3
CBX3P4-202ENST00000540428 WDR27A2RRH5 827 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 FAM170BA6NMN3 283 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 I3L4J1 428 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 ABLIM1O14639 778 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 NCAM2O15394 837 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 LAMTOR5O43504 91 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 HIP1RO75146 1068 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 LRRN2O75325 713 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 PRPHP41219 470 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 PTGDRQ13258 359 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 MRPL58Q14197 206 aaKnown RBP13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 SLC5A9Q2M3M2 681 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 ERICH6BQ5W0A0 696 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 TPGS2Q68CL5 300 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 MPZL3Q6UWV2 235 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 TAS1R3Q7RTX0 852 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 KCTD17Q8N5Z5 321 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 RUBCNQ92622 972 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 ELSPBP1Q96BH3 223 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 ZMAT2Q96NC0 199 aaKnown RBP13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 NTPCRQ9BSD7 190 aaKnown RBP13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 TARS2Q9BW92 718 aaKnown RBP13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 SPATA6Q9NWH7 488 aaPredicted RBP13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 MAFFQ9ULX9 164 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 VWA8A3KMH1 1905 aa13.15□□□□□ -0.3
CBX3P4-202ENST00000540428 E9PMD0 336 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 PRRG1O14668 218 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 ZNF197O14709 1029 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 SPTLC1O15269 473 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 RPS9P46781 194 aaKnown RBP13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 TOB1P50616 345 aaPredicted RBP13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 OSTNP61366 133 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 MAPK7Q13164 816 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 NBR1Q14596 966 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 UBXN2BQ14CS0 331 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 PRSS36Q5K4E3 855 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 RINT1Q6NUQ1 792 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 C1orf186Q6ZWK4 172 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 SUMF1Q8NBK3 374 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 SPIRE2Q8WWL2 714 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 ING5Q8WYH8 240 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 DNASE1L2Q92874 299 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 CLDN23Q96B33 292 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 MCRS1Q96EZ8 462 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 SUSD3Q96L08 255 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 TCHPQ9BT92 498 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 RUSC1Q9BVN2 902 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 CYP4F11Q9HBI6 524 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 MRPS17Q9Y2R5 130 aaKnown RBP13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 NUB1Q9Y5A7 615 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 PCDHB6Q9Y5E3 794 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 SPTBN4Q9H254 2564 aa13.14□□□□□ -0.31
CBX3P4-202ENST00000540428 TOM1L1O75674 476 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 SEC24BO95487 1268 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 CEBPBP17676 345 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 GUCY2CP25092 1073 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 STRN3Q13033 797 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 ZNF280DQ6N043 979 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 ZNF852Q6ZMS4 543 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 DTHD1Q6ZMT9 781 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 TPRG1Q6ZUI0 275 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 LEMD2Q8NC56 503 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 APPL2Q8NEU8 664 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 HINFPQ9BQA5 517 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 FBXL5Q9UKA1 691 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 MTF2Q9Y483 593 aaPredicted RBP13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 PCDHGA2Q9Y5H1 932 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 INSL5Q9Y5Q6 135 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 EP300Q09472 2414 aaPredicted RBP13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 DOCK6Q96HP0 2047 aa13.13□□□□□ -0.31
CBX3P4-202ENST00000540428 MYH15Q9Y2K3 1946 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 SLC16A4O15374 487 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 FCARP24071 287 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 TARSP26639 723 aaKnown RBP13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 SMTNP53814 917 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 NOLC1Q14978 699 aaKnown RBP eCLIP13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 CTXN3Q4LDR2 81 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 HYIQ5T013 277 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 CYP4A22Q5TCH4 519 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 TANGO2Q6ICL3 276 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 IQCEQ6IPM2 695 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 POTEHQ6S545 545 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 ZPBP2Q6X784 338 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 PDZD4Q76G19 769 aaPredicted RBP13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 KIAA2013Q8IYS2 634 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 ELMOD1Q8N336 334 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 ZBTB44Q8NCP5 570 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 NELL1Q92832 810 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 RMDN1Q96DB5 314 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 CORO1BQ9BR76 489 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 MMTAG2Q9BU76 263 aaKnown RBP13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 OXCT2Q9BYC2 517 aaPredicted RBP13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 PLA2G2FQ9BZM2 168 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 PLEKHA5Q9HAU0 1116 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms