RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 LLGL2Q6P1M3 1020 aa14.56□□□□□ -0.08
CCDC130-202ENST00000540216 ELMSAN1Q6PJG2 1045 aa14.56□□□□□ -0.08
CCDC130-202ENST00000540216 GRAMD1CQ8IYS0 662 aa14.56□□□□□ -0.08
CCDC130-202ENST00000540216 ZNF507Q8TCN5 953 aa14.56□□□□□ -0.08
CCDC130-202ENST00000540216 SLC22A17Q8WUG5 538 aa14.56□□□□□ -0.08
CCDC130-202ENST00000540216 RIN2Q8WYP3 895 aaPredicted RBP14.56□□□□□ -0.08
CCDC130-202ENST00000540216 PIK3R5Q8WYR1 880 aa14.56□□□□□ -0.08
CCDC130-202ENST00000540216 C18orf25Q96B23 403 aaPredicted RBP14.56□□□□□ -0.08
CCDC130-202ENST00000540216 UHRF1Q96T88 793 aaPredicted RBP14.56□□□□□ -0.08
CCDC130-202ENST00000540216 GOLPH3LQ9H4A5 285 aa14.56□□□□□ -0.08
CCDC130-202ENST00000540216 EXOC1Q9NV70 894 aa14.56□□□□□ -0.08
CCDC130-202ENST00000540216 PRKAG3Q9UGI9 489 aa14.56□□□□□ -0.08
CCDC130-202ENST00000540216 DPP7Q9UHL4 492 aa14.56□□□□□ -0.08
CCDC130-202ENST00000540216 C2CD2Q9Y426 696 aa14.56□□□□□ -0.08
CCDC130-202ENST00000540216 NCOR1O75376 2440 aa14.56□□□□□ -0.08
CCDC130-202ENST00000540216 A0A0C4DFX4 3053 aa14.56□□□□□ -0.08
CCDC130-202ENST00000540216 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.55□□□□□ -0.08
CCDC130-202ENST00000540216 TEX28O15482 410 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 FGFR3P22607 806 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 PAX3P23760 479 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 CASP1P29466 404 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 ACOT2P49753 483 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 CLCN4P51793 760 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 RBM10P98175 930 aaKnown RBP14.55□□□□□ -0.08
CCDC130-202ENST00000540216 PSMD2Q13200 908 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 SMAD2Q15796 467 aaKnown RBP14.55□□□□□ -0.08
CCDC130-202ENST00000540216 BMT2Q1RMZ1 405 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 RTP2Q5QGT7 225 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 KANK3Q6NY19 840 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 ARMCX5Q6P1M9 558 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 KRBA2Q6ZNG9 492 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 NT5DC4Q86YG4 428 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 C3orf58Q8NDZ4 430 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 BEST2Q8NFU1 509 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 HPS3Q969F9 1004 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 CCDC47Q96A33 483 aaKnown RBP14.55□□□□□ -0.08
CCDC130-202ENST00000540216 IKZF4Q9H2S9 585 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 CGNQ9P2M7 1197 aaKnown RBP14.55□□□□□ -0.08
CCDC130-202ENST00000540216 TUBGCP4Q9UGJ1 667 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 NUB1Q9Y5A7 615 aa14.55□□□□□ -0.08
CCDC130-202ENST00000540216 DLL1O00548 723 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 SYN3O14994 580 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 KLRC4O43908 158 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 EXTL3O43909 919 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 ZNF202O95125 648 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 GLUD1P00367 558 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 IL9P15248 144 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 ITIH3Q06033 890 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 TMEM132DQ14C87 1099 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 CLUL1Q15846 466 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 PSMD5Q16401 504 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 SPATA1Q5VX52 437 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 JADE1Q6IE81 842 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 SYCE2Q6PIF2 218 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 CD300LGQ6UXG3 332 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 CRELD2Q6UXH1 353 aaPredicted RBP14.54□□□□□ -0.08
CCDC130-202ENST00000540216 HS2ST1Q7LGA3 356 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 CEP57Q86XR8 500 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 BRSK2Q8IWQ3 736 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 GLIS3Q8NEA6 775 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 SCFD1Q8WVM8 642 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 B3GALT6Q96L58 329 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 FAM213AQ9BRX8 229 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 KIAA1586Q9HCI6 787 aa14.54□□□□□ -0.08
CCDC130-202ENST00000540216 NFICP08651 508 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 EPCAMP16422 314 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 MCM4P33991 863 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 HOXD13P35453 343 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 SPAG1Q07617 926 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 KMT5BQ4FZB7 885 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 PRSS55Q6UWB4 352 aaPredicted RBP14.53□□□□□ -0.08
CCDC130-202ENST00000540216 ANKS3Q6ZW76 656 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 GPD1LQ8N335 351 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 GOLGA5Q8TBA6 731 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 LNX1Q8TBB1 728 aaPredicted RBP14.53□□□□□ -0.08
CCDC130-202ENST00000540216 HDAC7Q8WUI4 952 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 SUSD6Q92537 303 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 FAM212AQ96EL1 285 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 SUSD3Q96L08 255 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 FBXL18Q96ME1 805 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 POP1Q99575 1024 aaKnown RBP14.53□□□□□ -0.08
CCDC130-202ENST00000540216 CBWD1Q9BRT8 395 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 S1PR5Q9H228 398 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 SFXN1Q9H9B4 322 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 SLC39A2Q9NP94 309 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 CHMP5Q9NZZ3 219 aa14.53□□□□□ -0.08
CCDC130-202ENST00000540216 USP15Q9Y4E8 981 aaPredicted RBP14.53□□□□□ -0.08
CCDC130-202ENST00000540216 TCF20Q9UGU0 1960 aaKnown RBP14.53□□□□□ -0.08
CCDC130-202ENST00000540216 TGFB1I1O43294 461 aa14.52□□□□□ -0.09
CCDC130-202ENST00000540216 RPN1P04843 607 aaKnown RBP14.52□□□□□ -0.09
CCDC130-202ENST00000540216 BRCC3P46736 316 aa14.52□□□□□ -0.09
CCDC130-202ENST00000540216 AARSP49588 968 aaKnown RBP eCLIP14.52□□□□□ -0.09
CCDC130-202ENST00000540216 FAM160A1Q05DH4 1040 aa14.52□□□□□ -0.09
CCDC130-202ENST00000540216 KNOP1Q1ED39 458 aaKnown RBP14.52□□□□□ -0.09
CCDC130-202ENST00000540216 CES5AQ6NT32 575 aa14.52□□□□□ -0.09
CCDC130-202ENST00000540216 ADHFE1Q8IWW8 467 aa14.52□□□□□ -0.09
CCDC130-202ENST00000540216 C12orf56Q8IXR9 622 aa14.52□□□□□ -0.09
CCDC130-202ENST00000540216 FMR1NBQ8N0W7 255 aaPredicted RBP14.52□□□□□ -0.09
CCDC130-202ENST00000540216 SAAL1Q96ER3 474 aa14.52□□□□□ -0.09
CCDC130-202ENST00000540216 NECTIN4Q96NY8 510 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms