RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 CRACR2AQ9BSW2 395 aa20.44■□□□□ 0.86
TNFRSF1A-213ENST00000540022 LRFN2Q9ULH4 789 aa20.44■□□□□ 0.86
TNFRSF1A-213ENST00000540022 PMM2O15305 246 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 INPPL1O15357 1258 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 P4HA2O15460 535 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 EFCAB14O75071 495 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 N4BP1O75113 896 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 BAIAP3O94812 1187 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 TPM3P06753 285 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 PBX1P40424 430 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 GUCY2FP51841 1108 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 BIRC3Q13489 604 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 GLB1LQ6UWU2 654 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 TRAPPC11Q7Z392 1133 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 TAS1R2Q8TE23 839 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 C18orf25Q96B23 403 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 MRFAP1L1Q96HT8 127 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 PPP1R10Q96QC0 940 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 ERGIC2Q96RQ1 377 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 TSPAN18Q96SJ8 248 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 INPP5FQ9Y2H2 1132 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 COQ4Q9Y3A0 265 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 LRRN2O75325 713 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 VNN1O95497 513 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 TNNC2P02585 160 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 KLK7P49862 253 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 SYCP1Q15431 976 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 EPC2Q52LR7 807 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 C1orf127Q8N9H9 656 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 CACTINQ8WUQ7 758 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 TUBGCP4Q9UGJ1 667 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 UBQLN1Q9UMX0 589 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 SIK3Q9Y2K2 1263 aa20.43■□□□□ 0.86
TNFRSF1A-213ENST00000540022 EYSQ5T1H1 3165 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 PTPRSQ13332 1948 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 A0A1W2PQC6 194 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 GTPBP10A4D1E9 387 aaKnown RBP20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 UPP2O95045 317 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 CST3P01034 146 aaPredicted RBP20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 POMCP01189 267 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 AMHP03971 560 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 THP07101 528 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 GATMP50440 423 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 SOX4Q06945 474 aaPredicted RBP20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 NAB2Q15742 525 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 EXOC3L4Q17RC7 722 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 GBP6Q6ZN66 633 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 FBXL13Q8NEE6 735 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 LMO3Q8TAP4 145 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 CXorf38Q8TB03 319 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 SEMA4DQ92854 862 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 TOP1MTQ969P6 601 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 DPP3Q9NY33 737 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 SIX4Q9UIU6 781 aa20.42■□□□□ 0.86
TNFRSF1A-213ENST00000540022 PHACTR2O75167 634 aa20.41■□□□□ 0.86
TNFRSF1A-213ENST00000540022 HLA-DRAP01903 254 aa20.41■□□□□ 0.86
TNFRSF1A-213ENST00000540022 SLC9A1P19634 815 aa20.41■□□□□ 0.86
TNFRSF1A-213ENST00000540022 NOMO2Q5JPE7 1267 aa20.41■□□□□ 0.86
TNFRSF1A-213ENST00000540022 ZNF697Q5TEC3 545 aa20.41■□□□□ 0.86
TNFRSF1A-213ENST00000540022 BEST2Q8NFU1 509 aa20.41■□□□□ 0.86
TNFRSF1A-213ENST00000540022 FAM161BQ96MY7 647 aa20.41■□□□□ 0.86
TNFRSF1A-213ENST00000540022 CASD1Q96PB1 797 aa20.41■□□□□ 0.86
TNFRSF1A-213ENST00000540022 GOLGA2P5Q9HBQ8 144 aa20.41■□□□□ 0.86
TNFRSF1A-213ENST00000540022 RNF216Q9NWF9 866 aaPredicted RBP20.41■□□□□ 0.86
TNFRSF1A-213ENST00000540022 RAB20Q9NX57 234 aa20.41■□□□□ 0.86
TNFRSF1A-213ENST00000540022 GCNT4Q9P109 453 aa20.41■□□□□ 0.86
TNFRSF1A-213ENST00000540022 GRXCR1A8MXD5 290 aa20.4■□□□□ 0.86
TNFRSF1A-213ENST00000540022 ITGB3P05106 788 aa20.4■□□□□ 0.86
TNFRSF1A-213ENST00000540022 CYP3A5P20815 502 aa20.4■□□□□ 0.86
TNFRSF1A-213ENST00000540022 PON1P27169 355 aa20.4■□□□□ 0.86
TNFRSF1A-213ENST00000540022 CETN1Q12798 172 aa20.4■□□□□ 0.86
TNFRSF1A-213ENST00000540022 GRIK3Q13003 919 aa20.4■□□□□ 0.86
TNFRSF1A-213ENST00000540022 VSTM4Q8IW00 320 aa20.4■□□□□ 0.86
TNFRSF1A-213ENST00000540022 EHBP1Q8NDI1 1231 aa20.4■□□□□ 0.86
TNFRSF1A-213ENST00000540022 TTYH1Q9H313 450 aaPredicted RBP20.4■□□□□ 0.86
TNFRSF1A-213ENST00000540022 HOXA2O43364 376 aa20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 XPOTO43592 962 aaKnown RBP20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 PIK3CAP42336 1068 aa20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 KCNJ6P48051 423 aa20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 APBA1Q02410 837 aa20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 NCOA4Q13772 614 aa20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 DPY19L2P1Q6NXN4 242 aa20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 FAM117BQ6P1L5 589 aa20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 ABI1Q8IZP0 508 aa20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 ELMO3Q96BJ8 720 aa20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 GUCD1Q96NT3 240 aa20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 INTS2Q9H0H0 1204 aaKnown RBP20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.39■□□□□ 0.853e-10■■■■■ 130.4
TNFRSF1A-213ENST00000540022 SLC38A7Q9NVC3 462 aa20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 ITGA11Q9UKX5 1188 aa20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 SLC4A7Q9Y6M7 1214 aa20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 CHD9Q3L8U1 2897 aa20.39■□□□□ 0.85
TNFRSF1A-213ENST00000540022 DGKIO75912 1065 aa20.38■□□□□ 0.85
TNFRSF1A-213ENST00000540022 KRT19P08727 400 aa20.38■□□□□ 0.85
TNFRSF1A-213ENST00000540022 DNAJB2P25686 324 aa20.38■□□□□ 0.85
TNFRSF1A-213ENST00000540022 POLR2BP30876 1174 aaKnown RBP20.38■□□□□ 0.85
TNFRSF1A-213ENST00000540022 TRIM65Q6PJ69 517 aa20.38■□□□□ 0.85
TNFRSF1A-213ENST00000540022 URGCPQ8TCY9 931 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms