RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 K7ENM7 598 aa18.3■□□□□ 0.52
DDB1-215ENST00000539712 NASPP49321 788 aaPredicted RBP18.3■□□□□ 0.52
DDB1-215ENST00000539712 SPAG1Q07617 926 aa18.3■□□□□ 0.52
DDB1-215ENST00000539712 MTMR3Q13615 1198 aa18.3■□□□□ 0.52
DDB1-215ENST00000539712 MRPL58Q14197 206 aaKnown RBP18.3■□□□□ 0.52
DDB1-215ENST00000539712 ENOX2Q16206 610 aaKnown RBP18.3■□□□□ 0.52
DDB1-215ENST00000539712 IER5LQ5T953 404 aa18.3■□□□□ 0.52
DDB1-215ENST00000539712 UBALD2Q8IYN6 164 aa18.3■□□□□ 0.52
DDB1-215ENST00000539712 FBXL6Q8N531 539 aa18.3■□□□□ 0.52
DDB1-215ENST00000539712 ACSF2Q96CM8 615 aaPredicted RBP18.3■□□□□ 0.52
DDB1-215ENST00000539712 STRA6Q9BX79 667 aa18.3■□□□□ 0.52
DDB1-215ENST00000539712 IKZF4Q9H2S9 585 aa18.3■□□□□ 0.52
DDB1-215ENST00000539712 ST6GALNAC4Q9H4F1 302 aa18.3■□□□□ 0.52
DDB1-215ENST00000539712 PLEKHA5Q9HAU0 1116 aa18.3■□□□□ 0.52
DDB1-215ENST00000539712 STK17AQ9UEE5 414 aa18.3■□□□□ 0.52
DDB1-215ENST00000539712 CDY1Q9Y6F8 540 aa18.3■□□□□ 0.52
DDB1-215ENST00000539712 LACTBL1A8MY62 500 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 TISP43B9A030 160 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 ANKRD63C9JTQ0 380 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 HNRNPDLO14979 420 aaKnown RBP18.29■□□□□ 0.52
DDB1-215ENST00000539712 TRAPPC3O43617 180 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 PPP1R37O75864 691 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 KRT18P05783 430 aaKnown RBP18.29■□□□□ 0.52
DDB1-215ENST00000539712 LIG4P49917 911 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 SLC8B1Q6J4K2 584 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 ANKS3Q6ZW76 656 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 DYMQ7RTS9 669 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 ZNF720Q7Z2F6 126 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 MAP4K3Q8IVH8 894 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 LINC00301Q8NCQ3 95 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 FAM122AQ96E09 287 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 BICD1Q96G01 975 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 ZHX3Q9H4I2 956 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 KCNK12Q9HB15 430 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 EPS15L1Q9UBC2 864 aa18.29■□□□□ 0.52
DDB1-215ENST00000539712 OGTO15294 1046 aa18.28■□□□□ 0.52
DDB1-215ENST00000539712 TBCAO75347 108 aaKnown RBP18.28■□□□□ 0.52
DDB1-215ENST00000539712 C8AP07357 584 aa18.28■□□□□ 0.52
DDB1-215ENST00000539712 VARS2Q5ST30 1063 aaKnown RBP18.28■□□□□ 0.52
DDB1-215ENST00000539712 AXDND1Q5T1B0 1012 aaPredicted RBP18.28■□□□□ 0.52
DDB1-215ENST00000539712 RRAGBQ5VZM2 374 aa18.28■□□□□ 0.52
DDB1-215ENST00000539712 SFR1Q86XK3 245 aa18.28■□□□□ 0.52
DDB1-215ENST00000539712 KRI1Q8N9T8 703 aaKnown RBP18.28■□□□□ 0.52
DDB1-215ENST00000539712 DDX12PQ92771 950 aa18.28■□□□□ 0.52
DDB1-215ENST00000539712 SUSD3Q96L08 255 aa18.28■□□□□ 0.52
DDB1-215ENST00000539712 PANK2Q9BZ23 570 aa18.28■□□□□ 0.52
DDB1-215ENST00000539712 CCDC39Q9UFE4 941 aa18.28■□□□□ 0.52
DDB1-215ENST00000539712 CPSF3Q9UKF6 684 aaKnown RBP18.28■□□□□ 0.52
DDB1-215ENST00000539712 STYXL1Q9Y6J8 313 aa18.28■□□□□ 0.52
DDB1-215ENST00000539712 CACNA1HO95180 2353 aa18.27■□□□□ 0.52
DDB1-215ENST00000539712 NOTCH4Q99466 2003 aa18.27■□□□□ 0.52
DDB1-215ENST00000539712 SYN3O14994 580 aa18.27■□□□□ 0.52
DDB1-215ENST00000539712 ABLIM3O94929 683 aa18.27■□□□□ 0.52
DDB1-215ENST00000539712 HNRNPA1P09651 372 aaKnown RBP eCLIP18.27■□□□□ 0.52
DDB1-215ENST00000539712 LRPAP1P30533 357 aa18.27■□□□□ 0.52
DDB1-215ENST00000539712 HOXA9P31269 272 aa18.27■□□□□ 0.52
DDB1-215ENST00000539712 MATR3P43243 847 aaKnown RBP eCLIP18.27■□□□□ 0.52
DDB1-215ENST00000539712 VCPP55072 806 aaKnown RBP18.27■□□□□ 0.52
DDB1-215ENST00000539712 NTHL1P78549 312 aa18.27■□□□□ 0.52
DDB1-215ENST00000539712 GRASPQ7Z6J2 395 aaPredicted RBP18.27■□□□□ 0.52
DDB1-215ENST00000539712 SLC7A14Q8TBB6 771 aa18.27■□□□□ 0.52
DDB1-215ENST00000539712 RSAD2Q8WXG1 361 aa18.27■□□□□ 0.52
DDB1-215ENST00000539712 KCNH6Q9H252 994 aa18.27■□□□□ 0.52
DDB1-215ENST00000539712 PIDD1Q9HB75 910 aa18.27■□□□□ 0.52
DDB1-215ENST00000539712 TFIP11Q9UBB9 837 aaKnown RBP18.27■□□□□ 0.52
DDB1-215ENST00000539712 CCL16O15467 120 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 POU2F2P09086 479 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 LAMP2P13473 410 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 ADSSP30520 456 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 AARSP49588 968 aaKnown RBP eCLIP18.26■□□□□ 0.51
DDB1-215ENST00000539712 GUCY2FP51841 1108 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 ROR1Q01973 937 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 KCNA1Q09470 495 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 TDGQ13569 410 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 KYAT1Q16773 422 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 UVSSAQ2YD98 709 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 PPM1LQ5SGD2 360 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 LIN9Q5TKA1 542 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 SV2BQ7L1I2 683 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 ZNF461Q8TAF7 563 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 STAMQ92783 540 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 KIF12Q96FN5 646 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 MSTO1Q9BUK6 570 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 VPS13AQ96RL7 3174 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 KMT2EQ8IZD2 1858 aa18.26■□□□□ 0.51
DDB1-215ENST00000539712 USP34Q70CQ2 3546 aa18.25■□□□□ 0.51
DDB1-215ENST00000539712 FRMD3A2A2Y4 597 aa18.25■□□□□ 0.51
DDB1-215ENST00000539712 WDR27A2RRH5 827 aa18.25■□□□□ 0.51
DDB1-215ENST00000539712 M0QZQ0 153 aa18.25■□□□□ 0.51
DDB1-215ENST00000539712 PPEF2O14830 753 aa18.25■□□□□ 0.51
DDB1-215ENST00000539712 CYP3A5P20815 502 aa18.25■□□□□ 0.51
DDB1-215ENST00000539712 GBP2P32456 591 aaPredicted RBP18.25■□□□□ 0.51
DDB1-215ENST00000539712 CRELD2Q6UXH1 353 aaPredicted RBP18.25■□□□□ 0.51
DDB1-215ENST00000539712 CCDC73Q6ZRK6 1079 aa18.25■□□□□ 0.51
DDB1-215ENST00000539712 PRSS33Q8NF86 280 aa18.25■□□□□ 0.51
DDB1-215ENST00000539712 FGFBP2Q9BYJ0 223 aa18.25■□□□□ 0.51
DDB1-215ENST00000539712 RPF1Q9H9Y2 349 aaKnown RBP18.25■□□□□ 0.51
DDB1-215ENST00000539712 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.25■□□□□ 0.51
DDB1-215ENST00000539712 IGSF9Q9P2J2 1179 aa18.25■□□□□ 0.51
DDB1-215ENST00000539712 FBXL5Q9UKA1 691 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms