RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 AGO4Q9HCK5 861 aaKnown RBP10.29□□□□□ -0.76
CDH13-204ENST00000539548 MLXIPLQ9NP71 852 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 BATF3Q9NR55 127 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 KLHL14Q9P2G3 628 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 FEM1BQ9UK73 627 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 PNMA3Q9UL41 463 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 TBX20Q9UMR3 447 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 UBIAD1Q9Y5Z9 338 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 COL11A2P13942 1736 aaPredicted RBP10.29□□□□□ -0.76
CDH13-204ENST00000539548 MAGEB2O15479 319 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 ABHD2P08910 425 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 CNGA1P29973 690 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 MSH2P43246 934 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 GCNT1Q02742 428 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 ENPEPQ07075 957 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 TKFCQ3LXA3 575 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 USP37Q86T82 979 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 ZNF677Q86XU0 584 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 MAP4K3Q8IVH8 894 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 C4orf19Q8IY42 314 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 LARGE2Q8N3Y3 721 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 CCDC89Q8N998 374 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 MAML1Q92585 1016 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 DHX38Q92620 1227 aaKnown RBP10.29□□□□□ -0.76
CDH13-204ENST00000539548 TBC1D22BQ9NU19 505 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 DNAJC17Q9NVM6 304 aaKnown RBP10.29□□□□□ -0.76
CDH13-204ENST00000539548 PKD2L1Q9P0L9 805 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 R3HDM2Q9Y2K5 976 aaKnown RBP10.29□□□□□ -0.76
CDH13-204ENST00000539548 MYPNQ86TC9 1320 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 ZC3H11AO75152 810 aaKnown RBP eCLIP10.28□□□□□ -0.76
CDH13-204ENST00000539548 WFS1O76024 890 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 PROSCO94903 275 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 KRT5P13647 590 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 FOXN2P32314 431 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 IL9RQ01113 521 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 MGAT5Q09328 741 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 NR1H3Q13133 447 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 ZNF365Q70YC5 407 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 SV2AQ7L0J3 742 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 DEFB132Q7Z7B7 95 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 ECHDC2Q86YB7 292 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 SRRM1Q8IYB3 904 aaKnown RBP10.28□□□□□ -0.76
CDH13-204ENST00000539548 NLGN1Q8N2Q7 840 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 TMEM161BQ8NDZ6 487 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 SAAL1Q96ER3 474 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 RMDN2Q96LZ7 410 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 PWWP2AQ96N64 755 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 GPRC5CQ9NQ84 441 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 ANKEF1Q9NU02 776 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 COL20A1Q9P218 1284 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 ZBTB21Q9ULJ3 1066 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 ASTN2O75129 1339 aaPredicted RBP10.28□□□□□ -0.76
CDH13-204ENST00000539548 FAM47DPA6NHR8 397 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 PSTPIP1O43586 416 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 ONECUT3O60422 494 aaPredicted RBP10.28□□□□□ -0.76
CDH13-204ENST00000539548 ATP5HO75947 161 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 RALAP11233 206 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 RRM1P23921 792 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 MAGEA4P43358 317 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 CCNG1P51959 295 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 SLC18A1P54219 525 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 BPIFB4P59827 614 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 LMNB2Q03252 620 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 CYP24A1Q07973 514 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 SPP2Q13103 211 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 ZKSCAN8Q15776 578 aaPredicted RBP10.28□□□□□ -0.76
CDH13-204ENST00000539548 AOC3Q16853 763 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 TMEM63BQ5T3F8 832 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 IZUMO3Q5VZ72 239 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 KIF2BQ8N4N8 673 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 IL31RAQ8NI17 732 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 THOC1Q96FV9 657 aaKnown RBP10.28□□□□□ -0.76
CDH13-204ENST00000539548 PITPNM3Q9BZ71 974 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 UBN1Q9NPG3 1134 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 TOPORSQ9NS56 1045 aaPredicted RBP10.28□□□□□ -0.76
CDH13-204ENST00000539548 TBK1Q9UHD2 729 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 STARD13Q9Y3M8 1113 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 PCDHB2Q9Y5E7 798 aa10.28□□□□□ -0.76
CDH13-204ENST00000539548 UMODL1Q5DID0 1318 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 UNC5CO95185 931 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 CYP1A1P04798 512 aaPredicted RBP10.27□□□□□ -0.77
CDH13-204ENST00000539548 ICAM1P05362 532 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 KLRC2P26717 231 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 PTGER2P43116 358 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 NPTX2P47972 431 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 WDR4P57081 412 aaKnown RBP10.27□□□□□ -0.77
CDH13-204ENST00000539548 PSMC5P62195 406 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 LACTBP83111 547 aaPredicted RBP10.27□□□□□ -0.77
CDH13-204ENST00000539548 GHRHRQ02643 423 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 NAA25Q14CX7 972 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 FAM102BQ5T8I3 360 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 PCNX4Q63HM2 1172 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 TDRPQ86YL5 185 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 RHOT1Q8IXI2 618 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 KATNAL2Q8IYT4 538 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 OGFOD1Q8N543 542 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 ZCCHC9Q8N567 271 aaKnown RBP10.27□□□□□ -0.77
CDH13-204ENST00000539548 ANKLE1Q8NAG6 615 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 DENND1AQ8TEH3 1009 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 CPA5Q8WXQ8 436 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms