RNA–Protein interactions for RNA: ENST00000539357.1

POLE-213, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 364 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-213	ENST00000539357	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.71	□□□□□ -0.21
POLE-213	ENST00000539357	TMEFF1	Q8IYR6	380 aa		13.71	□□□□□ -0.21
POLE-213	ENST00000539357	ZNF654	Q8IZM8	581 aa		13.71	□□□□□ -0.21
POLE-213	ENST00000539357	SYNPO	Q8N3V7	929 aa		13.71	□□□□□ -0.21
POLE-213	ENST00000539357	DEFB119	Q8N690	84 aa		13.71	□□□□□ -0.21
POLE-213	ENST00000539357	RPLP0P6	Q8NHW5	317 aa		13.71	□□□□□ -0.21
POLE-213	ENST00000539357	SHKBP1	Q8TBC3	707 aa		13.71	□□□□□ -0.21
POLE-213	ENST00000539357	RLN3	Q8WXF3	142 aa		13.71	□□□□□ -0.21
POLE-213	ENST00000539357	ADAMTS14	Q8WXS8	1223 aa		13.71	□□□□□ -0.21
POLE-213	ENST00000539357	TMEM209	Q96SK2	561 aa		13.71	□□□□□ -0.21
POLE-213	ENST00000539357	IL25	Q9H293	177 aa		13.71	□□□□□ -0.21
POLE-213	ENST00000539357	CYP4F11	Q9HBI6	524 aa		13.71	□□□□□ -0.21
POLE-213	ENST00000539357	CEP72	Q9P209	647 aa		13.71	□□□□□ -0.21
POLE-213	ENST00000539357	ATM	Q13315	3056 aa		13.71	□□□□□ -0.22
POLE-213	ENST00000539357	KIAA1549L	Q6ZVL6	1849 aa		13.71	□□□□□ -0.22
POLE-213	ENST00000539357	TRIP11	Q15643	1979 aa		13.71	□□□□□ -0.22
POLE-213	ENST00000539357	ZMYM2	Q9UBW7	1377 aa		13.71	□□□□□ -0.22
POLE-213	ENST00000539357	SPTA1	P02549	2419 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	DDX11L8	A8MPP1	907 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	ZNF197	O14709	1029 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	MS4A1	P11836	297 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	CD59	P13987	128 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	TKT	P29401	623 aa	Known RBP	13.7	□□□□□ -0.22
POLE-213	ENST00000539357	SREBF1	P36956	1147 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	PTGER3	P43115	390 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	PDE1A	P54750	535 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	NAPA	P54920	295 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	ANTXR2	P58335	489 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	LMAN2	Q12907	356 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	PRR16	Q569H4	304 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	HDDC3	Q8N4P3	179 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	CAMKK1	Q8N5S9	505 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	SPRYD3	Q8NCJ5	442 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	CHFR	Q96EP1	664 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	TBC1D22B	Q9NU19	505 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	MTRR	Q9UBK8	725 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357	COL4A3BP	Q9Y5P4	624 aa		13.7	□□□□□ -0.22
POLE-213	ENST00000539357		A0A1W2PRU2	124 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	ARHGEF37	A1IGU5	675 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	FAM149A	A5PLN7	773 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	TRABD2B	A6NFA1	517 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	TSPAN1	O60635	241 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	NPTXR	O95502	500 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	ELF1	P32519	619 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	MFAP1	P55081	439 aa	Known RBP	13.69	□□□□□ -0.22
POLE-213	ENST00000539357	MLLT6	P55198	1093 aa	Predicted RBP	13.69	□□□□□ -0.22
POLE-213	ENST00000539357	ROR1	Q01973	937 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	CACNB1	Q02641	598 aa	Predicted RBP	13.69	□□□□□ -0.22
POLE-213	ENST00000539357	FCHO2	Q0JRZ9	810 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	KARS	Q15046	597 aa	Known RBP	13.69	□□□□□ -0.22
POLE-213	ENST00000539357	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.69	□□□□□ -0.22
POLE-213	ENST00000539357	FAM181A	Q8N9Y4	354 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	PRPF31	Q8WWY3	499 aa	Known RBP	13.69	□□□□□ -0.22
POLE-213	ENST00000539357	MSANTD3	Q96H12	275 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	SMG9	Q9H0W8	520 aa	Known RBP	13.69	□□□□□ -0.22
POLE-213	ENST00000539357	UNC45A	Q9H3U1	944 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	PRORY	Q9H606	182 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	TRPV4	Q9HBA0	871 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	RIC8A	Q9NPQ8	531 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	STK24	Q9Y6E0	443 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	COL5A1	P20908	1838 aa	Predicted RBP	13.69	□□□□□ -0.22
POLE-213	ENST00000539357	ARID2	Q68CP9	1835 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	MGA	Q8IWI9	3026 aa		13.69	□□□□□ -0.22
POLE-213	ENST00000539357	PTPN13	Q12923	2485 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357		A0A087WV48	116 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	OTOL1	A6NHN0	477 aa	Predicted RBP	13.68	□□□□□ -0.22
POLE-213	ENST00000539357	WDR64	B1ANS9	1081 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	MAF	O75444	373 aa	Predicted RBP	13.68	□□□□□ -0.22
POLE-213	ENST00000539357	APBB3	O95704	486 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	BRCC3	P46736	316 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	NT5C2	P49902	561 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	ADCY7	P51828	1080 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	ATXN3	P54252	364 aa	Predicted RBP	13.68	□□□□□ -0.22
POLE-213	ENST00000539357	NPEPPS	P55786	919 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	CDC42EP1	Q00587	391 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	TWF1	Q12792	350 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	GRIK3	Q13003	919 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	PSMD2	Q13200	908 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	DMC1	Q14565	340 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	ANKRD45	Q5TZF3	282 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	TRIM68	Q6AZZ1	485 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	NIPA1	Q7RTP0	329 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	DAGLB	Q8NCG7	672 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	CNNM3	Q8NE01	707 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	IGDCC4	Q8TDY8	1250 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	DDX27	Q96GQ7	796 aa	Known RBP	13.68	□□□□□ -0.22
POLE-213	ENST00000539357	DNMT3L	Q9UJW3	386 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	GIT1	Q9Y2X7	761 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	PCDHB9	Q9Y5E1	797 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	INSL5	Q9Y5Q6	135 aa		13.68	□□□□□ -0.22
POLE-213	ENST00000539357	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.67	□□□□□ -0.22
POLE-213	ENST00000539357	SMCO2	A6NFE2	343 aa		13.67	□□□□□ -0.22
POLE-213	ENST00000539357	GOLGA8CP	A6NN73	597 aa		13.67	□□□□□ -0.22
POLE-213	ENST00000539357	B4GALT5	O43286	388 aa		13.67	□□□□□ -0.22
POLE-213	ENST00000539357	OPHN1	O60890	802 aa		13.67	□□□□□ -0.22
POLE-213	ENST00000539357	ATG13	O75143	517 aa		13.67	□□□□□ -0.22
POLE-213	ENST00000539357	ERLIN2	O94905	339 aa		13.67	□□□□□ -0.22
POLE-213	ENST00000539357	EIF2S3	P41091	472 aa	Known RBP	13.67	□□□□□ -0.22
POLE-213	ENST00000539357	SPIRE1	Q08AE8	756 aa		13.67	□□□□□ -0.22
POLE-213	ENST00000539357	LAMTOR4	Q0VGL1	99 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms