RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CNKSR3Q6P9H4 555 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 GLB1LQ6UWU2 654 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 RRAGAQ7L523 313 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ECHDC2Q86YB7 292 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PPM1KQ8N3J5 372 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SMG8Q8ND04 991 aaKnown RBP11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PLEKHO2Q8TD55 490 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 LPPQ93052 612 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SNX27Q96L92 541 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PPP1R9BQ96SB3 815 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 GAD1Q99259 594 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 NUCKS1Q9H1E3 243 aaKnown RBP11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TMX1Q9H3N1 280 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TBX21Q9UL17 535 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 AGAP1Q9UPQ3 857 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 BRCA2P51587 3418 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TTC26A0AVF1 554 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ZBBXA8MT70 800 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ENPP3O14638 875 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 KIAA0355O15063 1070 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 HOXA2O43364 376 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 MGEA5O60502 916 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ZNF623O75123 536 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 UPP2O95045 317 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 AMHP03971 560 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 C4BPAP04003 597 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ITGB3P05106 788 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 MLH1P40692 756 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 YWHAEP62258 255 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TNNC1P63316 161 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 KCNMA1Q12791 1236 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PPIGQ13427 754 aaKnown RBP eCLIP11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 DSC3Q14574 896 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 MBTPS1Q14703 1052 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ZNF699Q32M78 642 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ZACNQ401N2 412 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PLEKHG4Q58EX7 1191 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ZNF667Q5HYK9 610 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SFMBT2Q5VUG0 894 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 MFSD5Q6N075 450 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TRIM65Q6PJ69 517 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 FMNL3Q8IVF7 1028 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 OR5B17Q8NGF7 314 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 OR8K1Q8NGG5 319 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ZNF516Q92618 1163 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 EDEM3Q9BZQ6 932 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PLCB1Q9NQ66 1216 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 CEP72Q9P209 647 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 KANSL3Q9P2N6 904 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 NXF1Q9UBU9 619 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 DNAJC12Q9UKB3 198 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ITGA11Q9UKX5 1188 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 C2CD2Q9Y426 696 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 DAAM1Q9Y4D1 1078 aa11.48□□□□□ -0.57
TNFRSF1A-211ENST00000538363 CITO14578 2027 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SMIM28A0A1B0GU29 152 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TRIM43BA6NCK2 446 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 FAM189A1O60320 539 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 EFCAB14O75071 495 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ZC3H11AO75152 810 aaKnown RBP eCLIP11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 POMCP01189 267 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 KRT5P13647 590 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 RFX1P22670 979 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 POLR2BP30876 1174 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 STAT1P42224 750 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ZBED6P86452 979 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ARID5AQ03989 594 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 FPGSQ05932 587 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ASIC2Q16515 512 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SPOUT1Q5T280 376 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 KLHDC7AQ5VTJ3 777 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TDRD10Q5VZ19 366 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TRAF7Q6Q0C0 670 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 MRPL10Q7Z7H8 261 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 HELQQ8TDG4 1101 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TAS1R2Q8TE23 839 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TAF4BQ92750 862 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TRIM43Q96BQ3 446 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ZNF560Q96MR9 790 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 MMS19Q96T76 1030 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PI4K2AQ9BTU6 479 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 OSBPL7Q9BZF2 842 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 WNT8AQ9H1J5 351 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 DEF6Q9H4E7 631 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 RNF19AQ9NV58 838 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 APEX2Q9UBZ4 518 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 CAPN11Q9UMQ6 739 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SIK3Q9Y2K2 1263 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SCN5AQ14524 2016 aa11.47□□□□□ -0.57
TNFRSF1A-211ENST00000538363 LTBP2Q14767 1821 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ABHD14A-ACY1A0A1B0GW23 586 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ARL5CA6NH57 179 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 C9IYK1 514 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PMM2O15305 246 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 IPO7O95373 1038 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 FGBP02675 491 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PFKMP08237 780 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 UCHL3P15374 230 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 KCNE1P15382 129 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms