RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 SIX1Q15475 284 aaPredicted RBP9.91□□□□□ -0.82
DDB1-211ENST00000538280 TARBP2Q15633 366 aaKnown RBP9.91□□□□□ -0.82
DDB1-211ENST00000538280 STXBP2Q15833 593 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 AGBL2Q5U5Z8 902 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 ZDHHC24Q6UX98 284 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 CRELD2Q6UXH1 353 aaPredicted RBP9.91□□□□□ -0.82
DDB1-211ENST00000538280 LBX2Q6XYB7 198 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 TMC3Q7Z5M5 1100 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 ZDHHC14Q8IZN3 488 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 UBL4BQ8N7F7 174 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 PRELID2Q8N945 189 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 ZNF564Q8TBZ8 553 aaPredicted RBP9.91□□□□□ -0.82
DDB1-211ENST00000538280 ASAP3Q8TDY4 903 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 TATDN2Q93075 761 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 CCDC127Q96BQ5 260 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 ATP6V1G3Q96LB4 118 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 POP1Q99575 1024 aaKnown RBP9.91□□□□□ -0.82
DDB1-211ENST00000538280 ERP44Q9BS26 406 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 CAPS2Q9BXY5 557 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 CELF4Q9BZC1 486 aaKnown RBP9.91□□□□□ -0.82
DDB1-211ENST00000538280 PLEKHA4Q9H4M7 779 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 TMEM134Q9H6X4 195 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 ZDHHC18Q9NUE0 388 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 SRRDQ9UH36 339 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 PCYOX1Q9UHG3 505 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 CNTN6Q9UQ52 1028 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 PPME1Q9Y570 386 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 PCDHA3Q9Y5H8 950 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 MYH9P35579 1960 aaKnown RBP9.91□□□□□ -0.82
DDB1-211ENST00000538280 GSTTP1A0A1W2PQM5 241 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 HNRNPDLO14979 420 aaKnown RBP9.9□□□□□ -0.82
DDB1-211ENST00000538280 VNN1O95497 513 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 KRT14P02533 472 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 CYP1A1P04798 512 aaPredicted RBP9.9□□□□□ -0.82
DDB1-211ENST00000538280 CYP2C8P10632 490 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 GLRA2P23416 452 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 GRK4P32298 578 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 GBP1P32455 592 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 FLT3P36888 993 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 RFC5P40937 340 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 WNT7BP56706 349 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 DR1Q01658 176 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 ZNF844Q08AG5 666 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 HLTFQ14527 1009 aaKnown RBP eCLIP9.9□□□□□ -0.82
DDB1-211ENST00000538280 MTERF2Q49AM1 385 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 SEL1L2Q5TEA6 688 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 GPAT2Q6NUI2 795 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 FOXR1Q6PIV2 292 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 SRLQ86TD4 932 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 JAMLQ86YT9 394 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 RIOX2Q8IUF8 465 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 UBR7Q8N806 425 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 DPF3Q92784 378 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 SLCO2A1Q92959 643 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 ZNF653Q96CK0 615 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 RUNDC3BQ96NL0 473 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 PCYT2Q99447 389 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 FAM213AQ9BRX8 229 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 TRIM51Q9BSJ1 452 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 NUP85Q9BW27 656 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 FAM129AQ9BZQ8 928 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 HAPLN2Q9GZV7 340 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 UNC93B1Q9H1C4 597 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 ACP6Q9NPH0 428 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 ZNF302Q9NR11 478 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 GRHL1Q9NZI5 618 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 FBXO40Q9UH90 709 aa9.9□□□□□ -0.82
DDB1-211ENST00000538280 UTP11Q9Y3A2 253 aaKnown RBP9.9□□□□□ -0.82
DDB1-211ENST00000538280 CNTNAP2Q9UHC6 1331 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 A0A0B4J269 797 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 MYO1FO00160 1098 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 LDHAP00338 332 aaKnown RBP9.89□□□□□ -0.83
DDB1-211ENST00000538280 HLA-DRAP01903 254 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 EDN1P05305 212 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 NUDT17P0C025 328 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 MYBL1P10243 752 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 USP8P40818 1118 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 GJA8P48165 433 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 FNTAP49354 379 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 LIG4P49917 911 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 GNGT1P63211 74 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 CENPCQ03188 943 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 PTP4A2Q12974 167 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 BIRC3Q13489 604 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 MESDQ14696 234 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 TDRD10Q5VZ19 366 aaKnown RBP9.89□□□□□ -0.83
DDB1-211ENST00000538280 NAA35Q5VZE5 725 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 SLFN12LQ6IEE8 588 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 AADACL2Q6P093 401 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 TTC27Q6P3X3 843 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 ANKRD23Q86SG2 305 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 SLC13A5Q86YT5 568 aaPredicted RBP9.89□□□□□ -0.83
DDB1-211ENST00000538280 MCOLN2Q8IZK6 566 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 SH2D3CQ8N5H7 860 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 PROCA1Q8NCQ7 364 aaPredicted RBP9.89□□□□□ -0.83
DDB1-211ENST00000538280 TRIM11Q96F44 468 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 LRCH3Q96II8 777 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 CGRRF1Q99675 332 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 PAGR1Q9BTK6 254 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 EPB41L4BQ9H329 900 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms