RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ATXN3LQ9H3M9 355 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 CTTNBP2NLQ9P2B4 639 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 NRBP1Q9UHY1 535 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 DBR1Q9UK59 544 aaKnown RBP7.77□□□□□ -1.17
MSH6-209ENST00000538136 PLAGL2Q9UPG8 496 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 MAFBQ9Y5Q3 323 aaPredicted RBP7.77□□□□□ -1.17
MSH6-209ENST00000538136 CCL16O15467 120 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 BDNFP23560 247 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 C4orf50Q6ZRC1 276 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 KIAA0895Q8NCT3 520 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 RNF139Q8WU17 664 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 MYLIPQ8WY64 445 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 TATDN2Q93075 761 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 PPP1R9BQ96SB3 815 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 PDLIM7Q9NR12 457 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 ADAMTS1Q9UHI8 967 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 MCM3APO60318 1980 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 BUB1O43683 1085 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 STAT1P42224 750 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 ALDH1A3P47895 512 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 SLC12A3P55017 1021 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 ARID5BQ14865 1188 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 C12orf29Q8N999 325 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 TMEM161BQ8NDZ6 487 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 EDEM1Q92611 657 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 TIFAQ96CG3 184 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 C11orf70Q9BRQ4 267 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 NDST4Q9H3R1 872 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 PLK2Q9NYY3 685 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 PCSK1NQ9UHG2 260 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 DNAJC12Q9UKB3 198 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 PCDHA2Q9Y5H9 948 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 AKAP11Q9UKA4 1901 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 SMIM35A0A1B0GVV1 85 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 PODXLO00592 558 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 PPEF2O14830 753 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 NBNO60934 754 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 GNL1P36915 607 aaPredicted RBP7.76□□□□□ -1.17
MSH6-209ENST00000538136 PPP6R3Q5H9R7 873 aaPredicted RBP7.76□□□□□ -1.17
MSH6-209ENST00000538136 RARS2Q5T160 578 aaKnown RBP7.76□□□□□ -1.17
MSH6-209ENST00000538136 KAZNQ674X7 775 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 TSHZ1Q6ZSZ6 1077 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 GET4Q7L5D6 327 aaPredicted RBP7.76□□□□□ -1.17
MSH6-209ENST00000538136 TRAPPC11Q7Z392 1133 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 KLHL23Q8NBE8 558 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 GOLGA5Q8TBA6 731 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 POF1BQ8WVV4 589 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 MCRS1Q96EZ8 462 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 GCNAQ96QF7 691 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 SPON2Q9BUD6 331 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 DDX43Q9NXZ2 648 aaKnown RBP7.76□□□□□ -1.17
MSH6-209ENST00000538136 NAGPAQ9UK23 515 aa7.76□□□□□ -1.17
MSH6-209ENST00000538136 ARL5CA6NH57 179 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 ATP2C2O75185 946 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 LDHAP00338 332 aaKnown RBP7.75□□□□□ -1.17
MSH6-209ENST00000538136 BRD2P25440 801 aaKnown RBP7.75□□□□□ -1.17
MSH6-209ENST00000538136 ICAM3P32942 547 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 COPB1P53618 953 aaKnown RBP7.75□□□□□ -1.17
MSH6-209ENST00000538136 NOP14P78316 857 aaKnown RBP7.75□□□□□ -1.17
MSH6-209ENST00000538136 PTK2Q05397 1052 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 VEPH1Q14D04 833 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 UVSSAQ2YD98 709 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 ACCSLQ4AC99 568 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 MDH1BQ5I0G3 518 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 RWDD4Q6NW29 188 aaKnown RBP7.75□□□□□ -1.17
MSH6-209ENST00000538136 CC2D1AQ6P1N0 951 aaPredicted RBP7.75□□□□□ -1.17
MSH6-209ENST00000538136 MOXD1Q6UVY6 613 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 ZNF467Q7Z7K2 595 aaPredicted RBP7.75□□□□□ -1.17
MSH6-209ENST00000538136 ELMOD1Q8N336 334 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 MSL3Q8N5Y2 521 aaKnown RBP7.75□□□□□ -1.17
MSH6-209ENST00000538136 RDM1Q8NG50 284 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 SENP8Q96LD8 212 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 CUEDC2Q9H467 287 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 ZDHHC4Q9NPG8 344 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 MRPL17Q9NRX2 175 aaKnown RBP7.75□□□□□ -1.17
MSH6-209ENST00000538136 FBXL21Q9UKT6 434 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 ODF2LQ9ULJ1 636 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 GRIN2DO15399 1336 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 ENPP3O14638 875 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 TRDMT1O14717 391 aaKnown RBP7.75□□□□□ -1.17
MSH6-209ENST00000538136 RFPL2O75678 378 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 DESP17661 470 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 EDNRBP24530 442 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 EPHB4P54760 987 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 MAP3K7CLP57077 242 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 DYNLT1P63172 113 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 RBP5P82980 135 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 PTK7Q13308 1070 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 PLD1Q13393 1074 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 KRT31Q15323 416 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 SPATA1Q5VX52 437 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 KCNT2Q6UVM3 1135 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 SV2AQ7L0J3 742 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 C4orf32Q8N8J7 132 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 WNK3Q9BYP7 1800 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 SPOPO43791 374 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 TSPAN1O60635 241 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 CASP14P31944 242 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 TAF6P49848 677 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 ADCY1Q08828 1119 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms