RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 PAGR1Q9BTK6 254 aa9.96□□□□□ -0.81
UBE3B-207ENST00000537063 AZI2Q9H6S1 392 aa9.96□□□□□ -0.81
UBE3B-207ENST00000537063 PTPRHQ9HD43 1115 aa9.96□□□□□ -0.81
UBE3B-207ENST00000537063 CHORDC1Q9UHD1 332 aaPredicted RBP9.96□□□□□ -0.81
UBE3B-207ENST00000537063 PPFIA2O75334 1257 aa9.96□□□□□ -0.82
UBE3B-207ENST00000537063 NOMO3P69849 1222 aa9.96□□□□□ -0.82
UBE3B-207ENST00000537063 MTMR3Q13615 1198 aa9.96□□□□□ -0.82
UBE3B-207ENST00000537063 Q3C1V9 767 aa9.96□□□□□ -0.82
UBE3B-207ENST00000537063 HSDL1Q3SXM5 330 aa9.96□□□□□ -0.82
UBE3B-207ENST00000537063 SEL1L2Q5TEA6 688 aa9.96□□□□□ -0.82
UBE3B-207ENST00000537063 SPOPLQ6IQ16 392 aa9.96□□□□□ -0.82
UBE3B-207ENST00000537063 FASTKD5Q7L8L6 764 aaKnown RBP9.96□□□□□ -0.82
UBE3B-207ENST00000537063 PHF13Q86YI8 300 aaPredicted RBP9.96□□□□□ -0.82
UBE3B-207ENST00000537063 SLC13A5Q86YT5 568 aaPredicted RBP9.96□□□□□ -0.82
UBE3B-207ENST00000537063 JAMLQ86YT9 394 aa9.96□□□□□ -0.82
UBE3B-207ENST00000537063 RUNDC3BQ96NL0 473 aa9.96□□□□□ -0.82
UBE3B-207ENST00000537063 RUFY1Q96T51 708 aa9.96□□□□□ -0.82
UBE3B-207ENST00000537063 TRIM51Q9BSJ1 452 aa9.96□□□□□ -0.82
UBE3B-207ENST00000537063 C2orf40Q9H1Z8 148 aa9.96□□□□□ -0.82
UBE3B-207ENST00000537063 ANKFY1Q9P2R3 1169 aa9.96□□□□□ -0.82
UBE3B-207ENST00000537063 NUB1Q9Y5A7 615 aa9.96□□□□□ -0.82
UBE3B-207ENST00000537063 UMODL1Q5DID0 1318 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 ASS1P00966 412 aaKnown RBP9.95□□□□□ -0.82
UBE3B-207ENST00000537063 PGK2P07205 417 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 NOP14P78316 857 aaKnown RBP9.95□□□□□ -0.82
UBE3B-207ENST00000537063 TTC27Q6P3X3 843 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 ABRAQ8N0Z2 381 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 BTBD6Q96KE9 485 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 MMP19Q99542 508 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 NFKBIZQ9BYH8 718 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 CPSF3Q9UKF6 684 aaKnown RBP9.95□□□□□ -0.82
UBE3B-207ENST00000537063 PLAAQ9Y263 795 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 GRIN2DO15399 1336 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 TMEM110-MUSTN1A8MSY1 372 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 TULP1O00294 542 aaPredicted RBP9.95□□□□□ -0.82
UBE3B-207ENST00000537063 FSCN2O14926 492 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 CALCAP01258 141 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 KRT14P02533 472 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 FLT3P36888 993 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 SLC1A1P43005 524 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 HNRNPH2P55795 449 aaKnown RBP9.95□□□□□ -0.82
UBE3B-207ENST00000537063 RWDD2BP57060 319 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 HLTFQ14527 1009 aaKnown RBP eCLIP9.95□□□□□ -0.82
UBE3B-207ENST00000537063 ZSCAN26Q16670 478 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 LDLRAD1Q5T700 205 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 ZDHHC24Q6UX98 284 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 LRRC31Q6UY01 552 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 TSHZ1Q6ZSZ6 1077 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 MOB2Q70IA6 237 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 FHDC1Q9C0D6 1143 aaPredicted RBP9.95□□□□□ -0.82
UBE3B-207ENST00000537063 GRHL1Q9NZI5 618 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 CALCOCO1Q9P1Z2 691 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 ZNF236Q9UL36 1845 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 OGTO15294 1046 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 CLDN3O15551 220 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 OSBPP22059 807 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 GBP1P32455 592 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 NF2P35240 595 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 FNTAP49354 379 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 BIRC3Q13489 604 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 NCOA4Q13772 614 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 NAA35Q5VZE5 725 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 KDM7AQ6ZMT4 941 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 UPF1Q92900 1129 aaKnown RBP eCLIP9.95□□□□□ -0.82
UBE3B-207ENST00000537063 OPTNQ96CV9 577 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 FAM129AQ9BZQ8 928 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 FZD8Q9H461 694 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 LRRC19Q9H756 370 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 TMBIM4Q9HC24 238 aa9.95□□□□□ -0.82
UBE3B-207ENST00000537063 FAM170AA1A519 330 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 SPOPO43791 374 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 PRKCBP05771 671 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 GJA5P36382 358 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 TNFSF9P41273 254 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 SURF1Q15526 300 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 PLEKHA7Q6IQ23 1121 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 TRIM50Q86XT4 487 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 RBBP8NLQ8NC74 664 aaPredicted RBP9.94□□□□□ -0.82
UBE3B-207ENST00000537063 C18orf8Q96DM3 657 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 JPH2Q9BR39 696 aaPredicted RBP9.94□□□□□ -0.82
UBE3B-207ENST00000537063 SPON1Q9HCB6 807 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 A6NNZ2 444 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 HMGB1P1B2RPK0 211 aaPredicted RBP9.94□□□□□ -0.82
UBE3B-207ENST00000537063 RRM1P23921 792 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 MAN1A1P33908 653 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 C1QBPQ07021 282 aaKnown RBP9.94□□□□□ -0.82
UBE3B-207ENST00000537063 KCTD2Q14681 263 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 TUBB8Q3ZCM7 444 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 LINC01465Q8N7H1 131 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 GTF3C2Q8WUA4 911 aaPredicted RBP9.94□□□□□ -0.82
UBE3B-207ENST00000537063 ATP6V1G3Q96LB4 118 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 RASAL2Q9UJF2 1139 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 TCRBV7S2A1N4TA0A589 114 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 PODXLO00592 558 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 CFHP08603 1231 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 HOXC6P09630 235 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 YBX3P16989 372 aaKnown RBP eCLIP9.94□□□□□ -0.82
UBE3B-207ENST00000537063 GNA15P30679 374 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 NSFP46459 744 aaKnown RBP9.94□□□□□ -0.82
UBE3B-207ENST00000537063 POU5F1BQ06416 359 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms