RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 OVOS2A0A0J9YW53 1432 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 OVOS2Q6IE36 1432 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 NRXN1Q9ULB1 1477 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 PPLO60437 1756 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 A0A1W2PRX2 142 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 NPEPPSL1A6NEC2 478 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 SLC26A4O43511 780 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 PRC1O43663 620 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 TOMM70O94826 608 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 POU2F2P09086 479 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 FTH1P19P0C7X4 201 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 ZSCAN22P10073 491 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-202ENST00000535689 CTSSP25774 331 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 MGAT1P26572 445 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 ADCY7P51828 1080 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 CREMQ03060 361 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 CD69Q07108 199 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 DLX2Q07687 328 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-202ENST00000535689 SP140Q13342 867 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 HDAC1Q13547 482 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-202ENST00000535689 TXNRD1Q16881 649 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 METTL24Q5JXM2 366 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 UBXN11Q5T124 520 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 ZFYVE27Q5T4F4 411 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 PHF19Q5T6S3 580 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 GLB1LQ6UWU2 654 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 USP45Q70EL2 814 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 GAREM2Q75VX8 874 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 SRGAP1Q7Z6B7 1085 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 C16orf71Q8IYS4 520 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-202ENST00000535689 ANKRD35Q8N283 1001 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 MAGEB6Q8N7X4 407 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 PPM1NQ8N819 430 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 GIMAP8Q8ND71 665 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-202ENST00000535689 OR7D4Q8NG98 312 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.12□□□□□ -1.75
SNHG1-202ENST00000535689 COA7Q96BR5 231 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 FAM193BQ96PV7 902 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-202ENST00000535689 LMF1Q96S06 567 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 ZCCHC4Q9H5U6 513 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 GPRC5DQ9NZD1 345 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 PAXBP1Q9Y5B6 917 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 IFT172Q9UG01 1749 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 TECPR2O15040 1411 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 ANKARQ7Z5J8 1434 aa4.12□□□□□ -1.75
SNHG1-202ENST00000535689 NRKQ7Z2Y5 1582 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 NOBOXO60393 691 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 CTNND1O60716 968 aaKnown RBP4.11□□□□□ -1.75
SNHG1-202ENST00000535689 TOX4O94842 621 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 PARNO95453 639 aaKnown RBP4.11□□□□□ -1.75
SNHG1-202ENST00000535689 SCGB1D2O95969 90 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 INHBBP09529 407 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 SNRPA1P09661 255 aaKnown RBP4.11□□□□□ -1.75
SNHG1-202ENST00000535689 ALAS1P13196 640 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 CR2P20023 1033 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 PDCP20941 246 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 SMARCA1P28370 1054 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 GZMKP49863 264 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 CACNB3P54284 484 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 EPHB4P54760 987 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 ANTXR2P58335 489 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 MXRA7P84157 204 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 CDC42EP1Q00587 391 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 APBA1Q02410 837 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 UBE3CQ15386 1083 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 PGS1Q32NB8 556 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 GADL1Q6ZQY3 521 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 FAM83AQ86UY5 434 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 CMIPQ8IY22 773 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 CAMKK1Q8N5S9 505 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 ANKRD53Q8N9V6 530 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 C3orf20Q8ND61 904 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 SHCBP1Q8NEM2 672 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 TSPEARQ8WU66 669 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 IL17RAQ96F46 866 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 FAM89AQ96GI7 184 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 CDK5RAP3Q96JB5 506 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 PDCD2LQ9BRP1 358 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 RHOBTB2Q9BYZ6 727 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 SIK2Q9H0K1 926 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 MS4A5Q9H3V2 200 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.11□□□□□ -1.75
SNHG1-202ENST00000535689 NCDNQ9UBB6 729 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 INTUQ9ULD6 942 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 KNDC1Q76NI1 1749 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 ABCA3Q99758 1704 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 AKAP12Q02952 1782 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 CASZ1Q86V15 1759 aa4.11□□□□□ -1.75
SNHG1-202ENST00000535689 CLTCL1P53675 1640 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 PARP4Q9UKK3 1724 aaKnown RBP4.1□□□□□ -1.75
SNHG1-202ENST00000535689 A0A0A6YYK5 440 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-202ENST00000535689 LCHNA4D1U4 455 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 B5MCH6 92 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 FZD9O00144 591 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 PJA2O43164 708 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 PCDHGA12O60330 932 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 CDC14BO60729 498 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 PPFIA4O75335 1185 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 MTHFD1P11586 935 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms