RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 FBXW11Q9UKB1 542 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 ANK1P16157 1881 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 WDFY4Q6ZS81 3184 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 RCCD1A6NED2 376 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 SFI1A8K8P3 1242 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 TRAPPC3O43617 180 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 PIGRP01833 764 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 HOXA9P31269 272 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 RPL9P32969 192 aaKnown RBP11.81□□□□□ -0.52
CCDC60-202ENST00000535685 MCL1Q07820 350 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 STRN3Q13033 797 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 RAB33AQ14088 237 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 PTPAQ15257 358 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 ZRSR1Q15695 479 aaKnown RBP11.81□□□□□ -0.52
CCDC60-202ENST00000535685 PSMD5Q16401 504 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 KYAT1Q16773 422 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 FBXL6Q8N531 539 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 CEP120Q8N960 986 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 KREMEN2Q8NCW0 462 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 FEZF2Q8TBJ5 459 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 LRRC15Q8TF66 581 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 RABGGTAQ92696 567 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 STAMQ92783 540 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 NXPE3Q969Y0 559 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 B3GALT6Q96L58 329 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 TSPAN18Q96SJ8 248 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 PRKD2Q9BZL6 878 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 PLEKHA5Q9HAU0 1116 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 IGSF9Q9P2J2 1179 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 MTRRQ9UBK8 725 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 CACNG4Q9UBN1 327 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 BACE2Q9Y5Z0 518 aa11.81□□□□□ -0.52
CCDC60-202ENST00000535685 B3GAT3O94766 335 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 ADRB2P07550 413 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 HNRNPA1P09651 372 aaKnown RBP eCLIP11.8□□□□□ -0.52
CCDC60-202ENST00000535685 PLCG1P19174 1290 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 SYT1P21579 422 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 DDIT3P35638 169 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 CLCNKBP51801 687 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 SOX4Q06945 474 aaPredicted RBP11.8□□□□□ -0.52
CCDC60-202ENST00000535685 RESTQ13127 1097 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 NOLC1Q14978 699 aaKnown RBP eCLIP11.8□□□□□ -0.52
CCDC60-202ENST00000535685 UVSSAQ2YD98 709 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 PRSS55Q6UWB4 352 aaPredicted RBP11.8□□□□□ -0.52
CCDC60-202ENST00000535685 HAUS6Q7Z4H7 955 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 PALB2Q86YC2 1186 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 SMG7Q92540 1137 aaKnown RBP11.8□□□□□ -0.52
CCDC60-202ENST00000535685 RAD54LQ92698 747 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 ZBTB45Q96K62 511 aaPredicted RBP11.8□□□□□ -0.52
CCDC60-202ENST00000535685 ZMAT2Q96NC0 199 aaKnown RBP11.8□□□□□ -0.52
CCDC60-202ENST00000535685 PLIN2Q99541 437 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 REEP2Q9BRK0 252 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 TCHPQ9BT92 498 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 ST6GALNAC4Q9H4F1 302 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 EPS15L1Q9UBC2 864 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 LIMD1Q9UGP4 676 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 SRPRBQ9Y5M8 271 aaKnown RBP11.8□□□□□ -0.52
CCDC60-202ENST00000535685 CLUHO75153 1309 aa11.8□□□□□ -0.52
CCDC60-202ENST00000535685 RIF1Q5UIP0 2472 aaKnown RBP11.79□□□□□ -0.52
CCDC60-202ENST00000535685 SYN3O14994 580 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 CLDN3O15551 220 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 MEFVO15553 781 aaPredicted RBP11.79□□□□□ -0.52
CCDC60-202ENST00000535685 TBC1D4O60343 1298 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 RFPL2O75678 378 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 CLTAP09496 248 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 RPL17P18621 184 aaKnown RBP11.79□□□□□ -0.52
CCDC60-202ENST00000535685 SP100P23497 879 aaPredicted RBP11.79□□□□□ -0.52
CCDC60-202ENST00000535685 GRIN1Q05586 938 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 RAD51AP2Q09MP3 1159 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 MRPL58Q14197 206 aaKnown RBP11.79□□□□□ -0.52
CCDC60-202ENST00000535685 ZBTB6Q15916 424 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 SLC10A6Q3KNW5 377 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 GLRA4Q5JXX5 417 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 NUDT18Q6ZVK8 323 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 ANKS3Q6ZW76 656 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 ZBTB33Q86T24 672 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 GPBP1Q86WP2 473 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 C3orf58Q8NDZ4 430 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 HASPINQ8TF76 798 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 LARP4BQ92615 738 aaKnown RBP11.79□□□□□ -0.52
CCDC60-202ENST00000535685 FIZ1Q96SL8 496 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 PARVGQ9HBI0 331 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCDC60-202ENST00000535685 STK17AQ9UEE5 414 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 ZFP37Q9Y6Q3 630 aaPredicted RBP11.79□□□□□ -0.52
CCDC60-202ENST00000535685 SCN1AP35498 2009 aa11.79□□□□□ -0.52
CCDC60-202ENST00000535685 F5P12259 2224 aa11.78□□□□□ -0.52
CCDC60-202ENST00000535685 NPHP3-ACAD11A0A0J9YXS1 232 aa11.78□□□□□ -0.52
CCDC60-202ENST00000535685 TTC26A0AVF1 554 aa11.78□□□□□ -0.52
CCDC60-202ENST00000535685 VPS37CA5D8V6 355 aaPredicted RBP11.78□□□□□ -0.52
CCDC60-202ENST00000535685 PODXLO00592 558 aa11.78□□□□□ -0.52
CCDC60-202ENST00000535685 FAM189A1O60320 539 aa11.78□□□□□ -0.52
CCDC60-202ENST00000535685 N4BP1O75113 896 aaKnown RBP11.78□□□□□ -0.52
CCDC60-202ENST00000535685 PDIA4P13667 645 aaKnown RBP11.78□□□□□ -0.52
CCDC60-202ENST00000535685 CYP3A5P20815 502 aa11.78□□□□□ -0.52
CCDC60-202ENST00000535685 LRPAP1P30533 357 aa11.78□□□□□ -0.52
CCDC60-202ENST00000535685 GTF2BQ00403 316 aa11.78□□□□□ -0.52
CCDC60-202ENST00000535685 POU5F1Q01860 360 aaKnown RBP11.78□□□□□ -0.52
CCDC60-202ENST00000535685 TDGQ13569 410 aa11.78□□□□□ -0.52
CCDC60-202ENST00000535685 MCM6Q14566 821 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms