RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 MROH7Q68CQ1 1323 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 DPPA5A6NC42 116 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 FAM47DPA6NHR8 397 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 GOLGA8RI6L899 631 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 CLGNO14967 610 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 SLC26A4O43511 780 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 PEX11AO75192 247 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 GAS8O95995 478 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 LINGO3P0C6S8 592 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 GYS1P13807 737 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 ATP5DP30049 168 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 PCK1P35558 622 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 TAS2R40P59535 323 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 NOP14P78316 857 aaKnown RBP14.25□□□□□ -0.13
HDAC4-214ENST00000535493 STRN3Q13033 797 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 SLC1A5Q15758 541 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 SNRNP35Q16560 246 aaKnown RBP14.25□□□□□ -0.13
HDAC4-214ENST00000535493 NFIL3Q16649 462 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 PLA2G4FQ68DD2 849 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 C12orf50Q8NA57 414 aaPredicted RBP14.25□□□□□ -0.13
HDAC4-214ENST00000535493 STRA6Q9BX79 667 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 TDRD3Q9H7E2 651 aaKnown RBP14.25□□□□□ -0.13
HDAC4-214ENST00000535493 METTL5Q9NRN9 209 aaKnown RBP14.25□□□□□ -0.13
HDAC4-214ENST00000535493 PPEF1O14829 653 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-214ENST00000535493 PPP1R12AO14974 1030 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-214ENST00000535493 GCAP28676 217 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 MAGEA4P43358 317 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 IL9RQ01113 521 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 CDR2Q01850 454 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 SETDB1Q15047 1291 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 GNPTABQ3T906 1256 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 RFWD3Q6PCD5 774 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 RFX8Q6ZV50 586 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 SPDYE1Q8NFV5 336 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-214ENST00000535493 HELQQ8TDG4 1101 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 DDX1Q92499 740 aaKnown RBP14.24□□□□□ -0.13
HDAC4-214ENST00000535493 SHC3Q92529 594 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 NPHS2Q9NP85 383 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 LARSQ9P2J5 1176 aaKnown RBP14.24□□□□□ -0.13
HDAC4-214ENST00000535493 SEL1LQ9UBV2 794 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 ZHX2Q9Y6X8 837 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 TAF1LQ8IZX4 1826 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 SPDYE5A6NIY4 337 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 ITGB5P18084 799 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 CA4P22748 312 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 POLGP54098 1239 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-214ENST00000535493 MFAP3P55082 362 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 GAD2Q05329 585 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 PTK6Q13882 451 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 TAF1BQ53T94 588 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-214ENST00000535493 PCNX4Q63HM2 1172 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 RNF43Q68DV7 783 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 ANKMY2Q8IV38 441 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 ARMC2Q8NEN0 867 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 ATL2Q8NHH9 583 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 IL31RAQ8NI17 732 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 CNKSR1Q969H4 720 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 SLC7A6OSQ96CW6 309 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-214ENST00000535493 COA1Q9GZY4 146 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 KIAA1586Q9HCI6 787 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 BATF3Q9NR55 127 aa14.24□□□□□ -0.13
HDAC4-214ENST00000535493 ASMTLO95671 621 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 POLR2MP0CAP2 368 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 FDX1P10109 184 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 GRIK3Q13003 919 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 BLMHQ13867 455 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 PLEKHG4Q58EX7 1191 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 FAM102BQ5T8I3 360 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 CDCA2Q69YH5 1023 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-214ENST00000535493 SPOPLQ6IQ16 392 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 ACAD10Q6JQN1 1059 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 SLC9A9Q8IVB4 645 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 MAML1Q92585 1016 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 DDX27Q96GQ7 796 aaKnown RBP14.23□□□□□ -0.13
HDAC4-214ENST00000535493 DENND2DQ9H6A0 471 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-214ENST00000535493 VPS37BQ9H9H4 285 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 PIDD1Q9HB75 910 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 UBN1Q9NPG3 1134 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 C2orf71A6NGG8 1288 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 MTA2O94776 668 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 TPBGLP0DKB5 382 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 ATF7P17544 494 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-214ENST00000535493 STAT2P52630 851 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 SPP2Q13103 211 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 EFTUD2Q15029 972 aaKnown RBP eCLIP14.23□□□□□ -0.132e-6■■■■■ 27.5
HDAC4-214ENST00000535493 ANO7Q6IWH7 933 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 MTDHQ86UE4 582 aaKnown RBP14.23□□□□□ -0.13
HDAC4-214ENST00000535493 ACCSQ96QU6 501 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 C11orf70Q9BRQ4 267 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 TRABDQ9H4I3 376 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 RNPEPL1Q9HAU8 725 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 SPATA31A6Q5VVP1 1343 aa14.23□□□□□ -0.13
HDAC4-214ENST00000535493 IFNB1P01574 187 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 GNAZP19086 355 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 PTDSS1P48651 473 aaKnown RBP14.22□□□□□ -0.13
HDAC4-214ENST00000535493 SATB1Q01826 763 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 TMEM179Q6ZVK1 233 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 MIER3Q7Z3K6 550 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 APBB1IPQ7Z5R6 666 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-214ENST00000535493 PRR11Q96HE9 360 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms