RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 CYP26B1Q9NR63 512 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 SLC9A1P19634 815 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 ORC1Q13415 861 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 AMHR2Q16671 573 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 CDC42EP5Q6NZY7 148 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 FAM136AQ96C01 138 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 DCUN1D1Q96GG9 259 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 MCEEQ96PE7 176 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 TMEM39BQ9GZU3 492 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 MID2Q9UJV3 735 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 PSMD14O00487 310 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 GUCA1CO95843 209 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 NRKQ7Z2Y5 1582 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 HECW2Q9P2P5 1572 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 CCDC188H7C350 402 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 ATP8B1O43520 1251 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 ADCK1Q86TW2 530 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 SNX31Q8N9S9 440 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 TFR2Q9UP52 801 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 TRIM33Q9UPN9 1127 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 DIS3Q9Y2L1 958 aaKnown RBP13.29□□□□□ -0.28
SPG11-203ENST00000535302 ZCCHC11Q5TAX3 1644 aaKnown RBP13.28□□□□□ -0.28
SPG11-203ENST00000535302 A0A087WUV0 522 aaPredicted RBP13.28□□□□□ -0.28
SPG11-203ENST00000535302 KPNA7A9QM74 516 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 MAP4P27816 1152 aaKnown RBP13.28□□□□□ -0.28
SPG11-203ENST00000535302 HMOX2P30519 316 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 DUOXA2Q1HG44 320 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 PPP1R14AQ96A00 147 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 TMEM117Q9H0C3 514 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 NPHS2Q9NP85 383 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 PARVAQ9NVD7 372 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 FAM47DPA6NHR8 397 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 MIF4GDA9UHW6 222 aaKnown RBP13.28□□□□□ -0.28
SPG11-203ENST00000535302 SCP2P22307 547 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 FUT11Q495W5 492 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 CC2D1AQ6P1N0 951 aaPredicted RBP13.28□□□□□ -0.28
SPG11-203ENST00000535302 ELMSAN1Q6PJG2 1045 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 ZNF280CQ8ND82 737 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 CHP1Q99653 195 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 OSBPL5Q9H0X9 879 aaPredicted RBP13.28□□□□□ -0.28
SPG11-203ENST00000535302 TJP2Q9UDY2 1190 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 F8W8V4 182 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 SPTLC1O15269 473 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 CYTH3O43739 400 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 MYO1DO94832 1006 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 AP2B1P63010 937 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 ATP2C1P98194 919 aaPredicted RBP13.28□□□□□ -0.28
SPG11-203ENST00000535302 KLHL38Q2WGJ6 581 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 GJB7Q6PEY0 223 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 TTC13Q8NBP0 860 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 LRRC37BQ96QE4 947 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 APOL5Q9BWW9 433 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 MUC3BQ9H195 1237 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 ZNF212Q9UDV6 495 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 PCDHGB4Q9UN71 923 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 PYGBP11216 843 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 TYK2P29597 1187 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 TPI1P60174 286 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 SMTNL2Q2TAL5 461 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 C6orf10Q5SRN2 563 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 EMBQ6PCB8 327 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 RHOT1Q8IXI2 618 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 C10orf53Q8N6V4 93 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 KRT87PA6NCN2 255 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 TSC22D2O75157 780 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 TRPC1P48995 793 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 ALDH6A1Q02252 535 aaKnown RBP13.28□□□□□ -0.28
SPG11-203ENST00000535302 SLC35G2Q8TBE7 412 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 ANKRD49Q8WVL7 239 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 SPIRE2Q8WWL2 714 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 ZFP42Q96MM3 310 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 WDR24Q96S15 920 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 TADA2AO75478 443 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 NPM3O75607 178 aaKnown RBP13.28□□□□□ -0.28
SPG11-203ENST00000535302 PARNO95453 639 aaKnown RBP13.28□□□□□ -0.28
SPG11-203ENST00000535302 TAF1CQ15572 869 aaPredicted RBP13.28□□□□□ -0.28
SPG11-203ENST00000535302 OLFML2BQ68BL8 750 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 CCDC81Q6ZN84 652 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 SAMD7Q7Z3H4 446 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 SLC44A2Q8IWA5 706 aaPredicted RBP13.28□□□□□ -0.28
SPG11-203ENST00000535302 CLEC4FQ8N1N0 589 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 TEX9Q8N6V9 391 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 ADGRG1Q9Y653 693 aa13.28□□□□□ -0.28
SPG11-203ENST00000535302 DDX5P17844 614 aaKnown RBP13.27□□□□□ -0.28
SPG11-203ENST00000535302 MMS22LQ6ZRQ5 1243 aa13.27□□□□□ -0.28
SPG11-203ENST00000535302 APPL2Q8NEU8 664 aa13.27□□□□□ -0.28
SPG11-203ENST00000535302 AGBL1Q96MI9 1066 aa13.27□□□□□ -0.28
SPG11-203ENST00000535302 DBR1Q9UK59 544 aaKnown RBP13.27□□□□□ -0.28
SPG11-203ENST00000535302 IYDQ6PHW0 289 aa13.27□□□□□ -0.28
SPG11-203ENST00000535302 LRRC1Q9BTT6 524 aa13.27□□□□□ -0.28
SPG11-203ENST00000535302 TMEM60Q9H2L4 133 aa13.27□□□□□ -0.28
SPG11-203ENST00000535302 ZDHHC9Q9Y397 364 aa13.27□□□□□ -0.28
SPG11-203ENST00000535302 FKBP9O95302 570 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 TCF3P15923 654 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 KRT4P19013 534 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 GUCY1A3Q02108 690 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 PDAP1Q13442 181 aaKnown RBP13.27□□□□□ -0.29
SPG11-203ENST00000535302 CEP55Q53EZ4 464 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 FKBP9P1Q75LS8 142 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 FLCNQ8NFG4 579 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms