RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 GAS2L3Q86XJ1 694 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 C3orf58Q8NDZ4 430 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 RAD54LQ92698 747 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 ZNF707Q96C28 371 aaPredicted RBP9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 ZMAT2Q96NC0 199 aaKnown RBP9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 NTPCRQ9BSD7 190 aaKnown RBP9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 RHOBTB2Q9BYZ6 727 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 PRKD2Q9BZL6 878 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 KCNH6Q9H252 994 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 ZHX3Q9H4I2 956 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 BLOC1S4Q9NUP1 217 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 CNTN3Q9P232 1028 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 FBXW11Q9UKB1 542 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 ODF2LQ9ULJ1 636 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 CLIC4Q9Y696 253 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 ZNF318Q5VUA4 2279 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 CLDN3O15551 220 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 ADAM12O43184 909 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 TRAPPC3O43617 180 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 N4BP1O75113 896 aaKnown RBP9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 TBCAO75347 108 aaKnown RBP9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 C8AP07357 584 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 KCNE1P15382 129 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 SYT1P21579 422 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 MARCKSP29966 332 aaPredicted RBP9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 OR1D2P34982 312 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 LIG4P49917 911 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 NHLH1Q02575 133 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 CEBPZQ03701 1054 aaKnown RBP9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 GABPB1Q06547 395 aaPredicted RBP9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 RESTQ13127 1097 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 SPECC1Q5M775 1068 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 PPM1LQ5SGD2 360 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 IER5LQ5T953 404 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 FAM173BQ6P4H8 233 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 ZPBP2Q6X784 338 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 HAUS6Q7Z4H7 955 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 MYCT1Q8N699 235 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 PRSS33Q8NF86 280 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 LARP4BQ92615 738 aaKnown RBP9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 C18orf25Q96B23 403 aaPredicted RBP9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 DDX27Q96GQ7 796 aaKnown RBP9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 MYADMQ96S97 322 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 MFSD1Q9H3U5 465 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 PARVGQ9HBI0 331 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 MTRRQ9UBK8 725 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 POLIQ9UNA4 740 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 NUB1Q9Y5A7 615 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 CDY1Q9Y6F8 540 aa9.32□□□□□ -0.92
SFSWAP-202ENST00000535202 MYH15Q9Y2K3 1946 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 DOCK6Q96HP0 2047 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 HNRNPDLO14979 420 aaKnown RBP9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 CCL16O15467 120 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 MEFVO15553 781 aaPredicted RBP9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 PAPLNO95428 1278 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 CXCL8P10145 99 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 AVPR2P30518 371 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 SPAG1Q07617 926 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 MCL1Q07820 350 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 TDGQ13569 410 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 RAB33AQ14088 237 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 PTPAQ15257 358 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 SLC10A6Q3KNW5 377 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 AXDND1Q5T1B0 1012 aaPredicted RBP9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 RSPO2Q6UXX9 243 aaPredicted RBP9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 ANKS3Q6ZW76 656 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 USP49Q70CQ1 688 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 GRASPQ7Z6J2 395 aaPredicted RBP9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 SLC7A14Q8TBB6 771 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 RSAD2Q8WXG1 361 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 EPSTI1Q96J88 318 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 CCSER1Q9C0I3 900 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 HAPLN2Q9GZV7 340 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 KCNK12Q9HB15 430 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 IGSF9Q9P2J2 1179 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 TUBGCP4Q9UGJ1 667 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 TBX20Q9UMR3 447 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 DUSP12Q9UNI6 340 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 BACE2Q9Y5Z0 518 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 DOCK8Q8NF50 2099 aa9.31□□□□□ -0.92
SFSWAP-202ENST00000535202 K7ELQ4 463 aaPredicted RBP9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 SYN3O14994 580 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 NARSO43776 548 aaKnown RBP9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 XYLBO75191 536 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 CLTAP09496 248 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 HNRNPA1P09651 372 aaKnown RBP eCLIP9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 CHRM1P11229 460 aaPredicted RBP9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 FSHRP23945 695 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 NMT1P30419 496 aaKnown RBP9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 HOXD11P31277 338 aaPredicted RBP9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 RPL9P32969 192 aaKnown RBP9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 TXLNAP40222 546 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 TNFSF9P41273 254 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 ZNF131P52739 623 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 ARPP19P56211 112 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 NTHL1P78549 312 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 PPP2R3AQ06190 1150 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 VARS2Q5ST30 1063 aaKnown RBP9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 ZBTB41Q5SVQ8 909 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 DYMQ7RTS9 669 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms